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GT14341

CSHL Arabidopsis genetrap mutant lines

Original: GT14341

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14341

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 904833 [Map]; Strand: w
      • AT3G03670.1 - [+] show detail - Peroxidase superfamily protein
        Distance: -1422; Region: intergenic
      • AT3G03680.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: -2667; Region: intergenic
    Flanking Genome Sequence: GT14341 - 5-prime edge 
    GGTATGACGT TATATTACCA TACCTTACGT AATTCCCAAC ATGATTTTAT 
    ATATAGTTTG ATTGGCCTGG TTGGATGTGT TTATAATTAT ACCGGATTAG 
    CTAGTACTAC TCTGGCGGTT TAATTAGGGC CATCTTCTCA TCAATAATCT 
    TTAAAATAAT GGATTTTGCT GAATGCTGAT TATAA

AT3G03670.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 4234 Blast hits to 4201 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 58; Plants - 4144; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G03680.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 14333 Blast hits to 8916 proteins in 1075 species: Archae - 59; Bacteria - 2640; Metazoa - 3947; Fungi - 1236; Plants - 1682; Viruses - 124; Other Eukaryotes - 4645 (source: NCBI BLink).
Link
InterPro Scan - TAIR