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GT14356

CSHL Arabidopsis genetrap mutant lines

Original: GT14356

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14356

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7102099 [Map]; Strand: w
      • AT1G20500.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14356 - 3-prime edge 
    GTATTTTACC GACCGTTACC GACCGTTTTC TCCCTACCGA TGTTCCACAC 
    CTACGGTTTA TTGACCTTCG CTATGGGCAC CGTAGCATTG GGTTTGACGG 
    TGGTGATCCT CCGGAGATTT CAGCTCCACG ATATGATGGA TGCGGCGGAG 
    AAACACCGAG CCACGGCTCT GGCTTTGGCG CCACCTGTTT TGGTAGCTAT 
    GATTAACGAA GCAGATCTGA TCAAGGCTAA GTACGATCTG AGCTCACTAA 
    AAACGGTAAG GTGTGGTGGA GCGCCGTTGA GCAAGGAGGT GACAGAAGGG 
    TTTCTAGAGA AATATCCGAC GGTTGATATT CTGCAAGGGT ATGCTTTGAC 
    GGAATCCAAC GGTGGAGGGG CTTTCA

AT1G20500.1

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT5G38120.1); Has 82776 Blast hits to 75503 proteins in 3739 species: Archae - 1179; Bacteria - 53477; Metazoa - 3434; Fungi - 4583; Plants - 2754; Viruses - 1; Other Eukaryotes - 17348 (source: NCBI BLink).
Link
InterPro Scan - TAIR