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GT14362

CSHL Arabidopsis genetrap mutant lines

Original: GT14362

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14362

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171894 [Map]; Strand: w
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14362 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACTTCC CGTTTTCATC CCTAGGCGTT 
    TGTTGGTGTT TCTTCAACTA ATGGAGATGA TTGGTTTGAG AAGTCGTCTC 
    TTGCTAGGAT GATTGCTGGT TCGGGTATTG ATGAGTATTA TGTGAGGCAG 
    AAATGGAGTT CGTTTACTCT TGAGACTAAG AAGATTGTTG AAGAGAAGTT 
    TCAGTTGATG CAAGCTAAAG AGCTTGAGGC TAAGTTGGAA AAGAATGTGC 
    GTTTGACTGA CCTTACGTCT TACTTCGTTG ATGCTTCGAA GAACTAGAGC 
    TATTAGTTAC TTAGATTTGT CGGTTTTTTG TATCGGAATG CTATGCATAA 
    TGCTTTCTTT TGTTTTTCGG ATTTAGGATT TGATTCTTTC TGGTTTGTTT 
    TTTTGGGGTT GAAAGATTCT CTACCTTATA ATATTTATTT TTTTATTCGT 
    CAACTTGTCC TTATTATACC TCATCTTTGT CTTTTAGAAG TTCTTGTACC 
    AACTCCAAGA ACGAATCTAT GTTCCTGACA AAACCGCCTT GTACCATTGT 
    TAGGTAAAGC TTCCCAACCA TAAGCATCTG CACTTTGTAA CTTGATTGTG 
    TTCTGTGAGA GTTGGAGTTT GAAAATGATG AGTAAACTGT TACATTGAGA 
    AAACAACTCT TACCAAATGA AGATTTTCTC TTCATAAGTT ATTTCCTAAA 
    TCAGACATTT AGCAAGTTAT ATCTACTTTG CATCCAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171967 [Map]; Strand: w
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14362 - 5-prime edge 
    CAACGCCAAG TCTTGCTTTA CAGAATCAAG CTTCTCCTTC ATCTCACTCG 
    ACAACTTTTT CGACACACCG TTGGACTTAG CATTAGAATC AAGAGCTATT 
    CCTTTAGGTC CCCAAATAAA CTTTGACAAT TCAAAAGCTT TCTTATCATG 
    AGCTTTCACA AACCTAGGCT CGTCCTTTCC TTCTTTAGCA CGGTACTTCT 
    TCCTTAAACT CCTAACCTTA TCCGAGAATT GACTCTTACT AACCTCAAAG 
    CTGATAGATT TCTTCTGGAA CTCGTAAAAC GCATTAGTAT CTGCGGAAGG 
    AGACTTCCCT GTATCAGCAT GATAATCTAT CATTCCTTGT AACATACAGA 
    TTTCGTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 172025 [Map]; Strand: w
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14362 - 5-prime edge 
    TTCGACACAC CGTTGGACTT AGCATTAGAA TCAAGAGCTA TTCCTTTAGG 
    TCCCCAAATA AACTTTGACA ATTCAAAAGC TTTCTTATCA TGAGCTTTCA 
    CAAACCTAGG TTCGTCCTTT CCTTCTTTAG CACGGTACTT CTTCCTTAAA 
    CTCCTAACCT TATCCGAGAA TTGACTCTTA CTAACCTCAA AGCTGATAGA 
    TTTCTTCTGG AACTCGTAAA ACGCATTAGT ATCTGCGGAA GGAGACTTCC 
    CTGTATCAGC ATGATAATCT ATCATTCCTT GTAACATAGA GATTTCGTCA 
    TCGTCACTCC ATAGTCTTTG AAAAAGTGCT GGCTTCTTTA CACTCTCTTC

AT4G00390.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; LOCATED IN: nucleolus; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT1G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR