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GT14377

CSHL Arabidopsis genetrap mutant lines

Original: GT14377

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14377

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 809767 [Map]; Strand: w
      • AT3G03400.1 - [+] show detail - EF hand calcium-binding protein family
        Distance: -609; Region: promoter
    Flanking Genome Sequence: GT14377 - 5-prime edge 
    CCTACTTTCT CCCTGGCGTT ATTGATTGTT TACTCGGATA AAATGCCATC 
    GCATTGGTTA AATATCAATC TAACTATCAT TTTTTTACAA TAACTCATGT 
    ACACTTGACT GCTGTTATCC AAGACACAAC AGCACTCATG AATCTCAGTC 
    GATTTCACCC TCTTCTACTT CATCGCACTC GACTAAANGA GNCGCTTAGC 
    AAGAGCGACC AGTCTCAGCG CTCTGCTTTG TAGTTTCCTT TTGCGTCCTG 
    CTGGATGCTT GAGTTACACT AAACTTGGAA CATAAGAGCA CGCTTGTGTC 
    CAACAGTTTG TGAAGATAGA TTCTCGTAGA TCCGATTCTC TTAATAAGTA 
    TCCATTCTCT CCAAGAATGA AAGATATTCG GAGTTTAAAA CCCTCACTAA 
    CCATGACGAC TTTCTTCTCT TCGTCGATGA TGAAACTCTC AGATGCTAAG 
    GAAACTACAG GACCCGTATT CACTTTCGAG AACTTGTTCC AAGACACCTT

AT3G03400.1

Model type
Protein coding
Short Description
EF hand calcium-binding protein family
Computational Description
EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G17470.1); Has 13690 Blast hits to 10114 proteins in 1236 species: Archae - 0; Bacteria - 48; Metazoa - 5217; Fungi - 2887; Plants - 3646; Viruses - 0; Other Eukaryotes - 1892 (source: NCBI BLink).
Link
InterPro Scan - TAIR