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GT14388

CSHL Arabidopsis genetrap mutant lines

Original: GT14388

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14388

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 847294 [Map]; Strand: w
      • AT3G03540.1 - [+] show detail - non-specific phospholipase C5
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14388 - 5-prime edge 
    CTCGATCTCA AGCCTCGTAA ACTTCTTTTA CCAGCATTTG GCCTTCGGAG 
    ACGTCATGTG ATGGATGATC ATCGTTAGCG GGATTCAACA ATAGATCATA 
    CCAACGTTGT TCAACCACAA CATAGTTCGG TAGATTCCCT TCTTTACAAT 
    CTTTCTTGAA TTGTAGTCCG TAGTCGTGGA AACGTGTCAA ATACTTGAGT 
    TTTCTCAAAT TCCTGAAAAA CCAAACACAA AAGAATACTA ATAAAGATTA 
    ATATCGCAAA GCAATATATA ATACTAAAAT CTTTTGCAAC TCGTAAAATA 
    TTAAGATACC TATAAAAGAG AGTAGTAGGA AAACATTGGT AATAAATCCC 
    AAAGGTAAAA CCAGCTTCAT CGAGTGACTC GAATATCGTC TTTCGTGGAA 
    AACCTTCGAT CAGTAATTTC CTCTCGTTGT TCGTTGTTCC GTGTGATGTT 
    TGCCGAATGT ATAAACAATC GGGTTTGGCT GTGTT

AT3G03540.1

Model type
Protein coding
Short Description
non-specific phospholipase C5
Curator Summary
Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions.
Computational Description
non-specific phospholipase C5 (NPC5); CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2077 Blast hits to 2037 proteins in 379 species: Archae - 32; Bacteria - 1720; Metazoa - 0; Fungi - 127; Plants - 154; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR