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GT14390

CSHL Arabidopsis genetrap mutant lines

Original: GT14390

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14390

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 809764 [Map]; Strand: w
      • AT3G03400.1 - [+] show detail - EF hand calcium-binding protein family
        Distance: -606; Region: promoter
    Flanking Genome Sequence: GT14390 - 5-prime edge 
    CATCCTACTT TCTCTCTCTC GACCAACCTC TTCATATTGC ATGAGATGAG 
    AGAAACCAAA TTAATAATAA AGAGTAAATC TTGTACAAAG AATAAGAGTA 
    AATGAAACAC ATAAATATTT AGGCTTTGTG AAATGAGACT AACTATCTCG 
    TTTAATTTCC TCCTTTTGCA TCTTAATGTA GATTACTTAT TGATTCGCTT 
    ATCAAGTGCG ACAAGTCTCA GCGCTCTGCT TTGTAGTTTC CTTTTGCCTC 
    CTGCTGGTTG CTTGAGTTAC ACTAAACTTG GAACATAAGA GCACGCTTGT 
    GTCCAACAGT TTGTGTAGAT AGATTCTCCT AGATCCAATT CTCTTAATAA 
    GTATCCATTC TCTCCAAGAA TGTAAGATAT TCGGTGTTTA AAACCCTCAC 
    TAACCATGAC GACTTTCTTC TCTTCGTCAA TGATGAAACT CTCAAATACT 
    AATGAAACTT C

AT3G03400.1

Model type
Protein coding
Short Description
EF hand calcium-binding protein family
Computational Description
EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G17470.1); Has 13690 Blast hits to 10114 proteins in 1236 species: Archae - 0; Bacteria - 48; Metazoa - 5217; Fungi - 2887; Plants - 3646; Viruses - 0; Other Eukaryotes - 1892 (source: NCBI BLink).
Link
InterPro Scan - TAIR