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GT14404

CSHL Arabidopsis genetrap mutant lines

Original: GT14404

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14404

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10984031 [Map]; Strand: c
      • AT1G30845.1 - [+] show detail - unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0...
        Distance: 3343; Region: intergenic
      • AT1G30850.1 - [+] show detail - root hair specific 4
        Distance: -1047; Region: intergenic
    Flanking Genome Sequence: GT14404 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTGTAG TATGTAATTA 
    AGGATACTGT TAAGCCTCAA TGTCCAGGGT CTGGGGTATT TGGACATCTC 
    TTGGACTCCA AGCGAGGAAG GGAAAGAGAC ACTACTATAT TTATATGTTT 
    TACTTACCAT ATCTTGGATC CACGAGGGTA AGAGCAGCAA AGGAGGACAT 
    TTTCCTCTTT GCTCTCTTCG TCTTCCTTTT TTTTTGTTTT TGCTTTTGTA 
    AATATGTGGG GGGAAATCTT ATTTCTGGTT AAAGGGGGTT GCCTCCTGAA 
    ACTCTCAACG CCAAATAACT AAATTATTGT TTGTATTATT TAGTCCCATG 
    TTAGTTTTTC TACTATGAAC ATGGAATTTT TGTTAAACAT TTGTTGATTT 
    GGACGTTTGT GGAACGTTTC AAAGAACCGA TTGTCAACAT TTGCACAATT 
    GCATTCTCTT TATTGGTTAA TCGAGTTTCC GGGATTCTAG AACGCCAAAA 
    AAGCACAGAA GGTTTAATAC TTATTGTTTT GCCTAAGGAG AAGGAAAATG 
    CGCAATACTT TCTTAAACCT TTTGTAGGTT TATGAAGGGT TTGATTTTTC 
    AAATAAAATG AGAATCAAGT TCGATGTACC ATGTTCACAT GTGACTTTGT 
    ACTATTTCAA ATGTTTCTTG GCAAGTAAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10983958 [Map]; Strand: c
      • AT1G30845.1 - [+] show detail - unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0...
        Distance: 3270; Region: intergenic
      • AT1G30850.1 - [+] show detail - root hair specific 4
        Distance: -1120; Region: intergenic
    Flanking Genome Sequence: GT14404 - 5-prime edge 
    CTTTCTCCCT GACTACACAG ATATGGCACA AGTTTTTGTC TTGCGATCAA 
    CAAACTATAG AACATTTTAC TAACAAAAAA TTAAATATGC TTAAAGATAA 
    AAAGAAAAAA CAAACAAACT ATAGAACAGC AGAAATATAA ATAATGATCT 
    TATGGTAGAG GCTTGGAGTA GCTAGGTATG ATGGGATCAT AGAGACCGCA 
    AGTATATGGC CTGGACCAAA TTTTGTTGGA TTTTTAAATA AGATTTAGTA 
    GATATTTTAG CTTTTACTCC ACACTGAAGT ACTTATTTGG AATTTTCCCC 
    TCTTCAACAT AAGTTACATA AAACAAAAAT CGACATTGTT TTGCAGAAAA 
    TTATAGCCCA TGAAAACAAA CTAGACAAAG ACAAACACAT AATAAAAAGA 
    AATAAAACAA CTTAACCTCG CCCGTGAACC GAAAAATCGG TTAGGATTTA 
    TATTTAAATC GCCTGGTTTA ATCGGTTGAG TTAATAGAAA TCCTAAAATG 
    TGCCAATAAA AGAAGGAAAC TCGAAATTAG GGCTTTGGTT AGCCACTTAA 
    AGAGAAAAAA AGAGAAGAAG AAGGACCAGA ATCGTTAGAG TTTGGTAGGA 
    AACAGTTTTA ACATATCAAA TCGTTTTCAA AGGTAACGAA ATTTAGTATG 
    GTTATTTCCA CGTCTTTCAT CGTCATTCTC CATTTTACAG AAGTGAATTT 
    GGATTTAAAC TCGTTGAGTT ATTTGCAGTT T

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10983962 [Map]; Strand: c
      • AT1G30845.1 - [+] show detail - unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0...
        Distance: 3274; Region: intergenic
      • AT1G30850.1 - [+] show detail - root hair specific 4
        Distance: -1116; Region: intergenic
    Flanking Genome Sequence: GT14404 - 5-prime edge 
    CCTACTTTCT CCCTGACTAC ACAGATATGG CACAAGTTTT TGTCTTGCGA 
    TCAACAAACT ATAGAACATT TTACTAACAA AAAATTAAAT ATGCTTAAAG 
    ATAAAAAGAA AAAACAAACA AACTATAGAA CAGCAGAAAT ATAAATAATG 
    ATCTTATGGT AGAGGCTTGG AGTAGCTAGG TATGATGGGA TCATAGAGAC 
    CGCAAGTATA TGGCCTGGAC CAAATTTTGT TGGATTTTTA AATAAGATTT 
    AGTAGATATT TTAGCTTTTA CTCCACACTG AAGTACTTAT TTGGAATTTT 
    CCCCTCTTCA ACATAAGTTA CATAAAACAA AAATCGACAT TGTTTTGCAG 
    AAAATTATAG CCCATGAAAA CAAACTAGAC AAAGACAAAC ACATAATAAA 
    AAGAAATAAA ACAACTTAAC CTCGCCCGTG AACCGAAAAA TCGGTTAGGA 
    TTTATATTTA AATCGCCTGG TTTAATCGGT TGAGTTAATA GAAATCCTAA 
    AATGTGCCAA TAAAAGAAGG AAACTCGAAA TTAGGGCTTT GGTTAGCCAC 
    TTAAAGAGAA AAAAAGAGAA GAAGAAGGAC CAGAATCGTT AGAGTTTGGT 
    AGGAAACAGT TTTAACATAT CAAATCGTTT TCAAAGGTAA CGAAATTTAG 
    TATGGTTATT TCCACGTCTT TCATCGTCAT TCTCCATTTT ACAGAAGTGA 
    ATTTGGATTT AAACTCGTTG AGTTATTTGC AGTT

AT1G30845.1

Model type
Protein coding
Computational Description
unknown protein; Has 120 Blast hits to 120 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 37; Plants - 23; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G30850.1

Model type
Protein coding
Short Description
root hair specific 4
Computational Description
root hair specific 4 (RSH4); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34910.1); Has 45 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR