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GT14408

CSHL Arabidopsis genetrap mutant lines

Original: GT14408

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14408

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14162299 [Map]; Strand: c
      • AT2G33420.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon6 (CDS)
      • AT2G33430.1 - [+] show detail - differentiation and greening-like 1
        Distance: -368; Region: promoter
    Flanking Genome Sequence: GT14408 - 5-prime edge 
    CCTTCACCAA CACCAACATA TTTTTTTGTT GAATTTTTCT TTTTTCCTTT 
    CTTACTTCTT CCCTCTCGAC CATCGTTTAG GCAATTGAAA CGATTTCTTT 
    AAAAACTGAT TAGCAACACG GTCGTTTCTA TGACAAAGTA CCCTCAAGAT 
    CGTGTTTGGA TCAGACCGGT TCCACCGTCC TGTAGTTGGA GGCATAGGTA 
    GCTTCTGTCC AGAACCAACC ATCCCCATTC CACTTGTCTC ACACGTTACA 
    ATACTAAAAT CTTCCATAAG TTGTTCTGTT GGTTGACTCA TAAGCTGAAT 
    CACTCCTTCC ACTGTCTCTG CCTCTCTGTC CACCACTTCT TCAGGTATCA 
    ACCCTTCACC ACAAGTACAA AAGACCCTTT TCAAGTTCTC GAAATCTTCT 
    TCGATAATAC TGTGATCCGA TCTATAGAAC ACTCGGGAGT ATCCACCGGC 
    GAGAAGGACC ATCAAGAACG CTTCGAATGA TGATTTCATA ACCTCCCTCA 
    TTGCTAATGA TTGAGCTCTA TCCGCAAGAA TCGCTGACAT CAATGTTAAG 
    TTCTGTTTCA TGATTCGTAA CGCTGGTCTG ATCCTCGCGT TCGCAACTTC 
    TCCTACAGGG AGGCTCTCGT ACAAAAAAGA GTTTGAAT

AT2G33420.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT1G04470.1); Has 196 Blast hits to 182 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G33430.1

Model type
Protein coding
Short Description
differentiation and greening-like 1
Computational Description
differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR