1. Home
  2. Mutant Lines
  3. GT14422

GT14422

CSHL Arabidopsis genetrap mutant lines

Original: GT14422

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14422

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11446384 [Map]; Strand: c
      • AT1G31880.1 - [+] show detail - DZC (Disease resistance/zinc finger/chromosome condensation-like region) doma...
        Distance: 0; Region: intron2 (5UTR)
    Flanking Genome Sequence: GT14422 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTGAGT 
    GAGTAATAAA CAAAACCCAC TAATCAAAAT TTTATTTTTT GGATTGTAAT
    GATTAAGAAA AAAAGAAGAA GTCGTTTTCT GAGGTGAGAA TAATAATGGG
    GTTTGTATCA GTTTGCCTTT GCTTTTGATA TCAAAACAGA GTTTTTTCGT
    GATTCGTGAT TGTTTTTGCG ATTTTATCTT TTTTACTTTG GATATAGTTT
    TAGTTTTCAT CTCACTCGAC C

AT1G31880.1

Model type
Protein coding
Short Description
DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
Curator Summary
Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.
Computational Description
BREVIS RADIX (BRX); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1); Has 707 Blast hits to 407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 705; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR