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GT14429

CSHL Arabidopsis genetrap mutant lines

Original: GT14429

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14429

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14565326 [Map]; Strand: w
      • AT4G29735.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -948; Region: promoter
      • AT4G29735.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -948; Region: promoter
      • AT4G29740.1 - [+] show detail - cytokinin oxidase 4
        Distance: -939; Region: promoter
      • AT4G29740.2 - [+] show detail - cytokinin oxidase 4
        Distance: -939; Region: promoter
    Flanking Genome Sequence: GT14429 - 5-prime edge 
    TATCATTCGT GTGCTTCACT CTCTAAACAT ATAGCGAAGT AAATTGACAA 
    AAAAAAAAAA ATTTTTGGGC CTTTTTAAAA AAACTGGGGG GGGGTTTACC 
    CCCCCCAACC CCAAAAAGGG GAAAGGTTTG GGTTTAAACC CCCCCCACAA 
    TTTTTTTTTT TTTTTAAAAG GTTTGCCCCC CTTTCGGGGG GAAATTTTGG 
    GGAACCAAAT TGGAAAACCC CCCAAAAATT GAATTTCGGG GGGAAAAAAA 
    CTTTTTTTTT TTCCCCCCCC CAAAAAAAAT TCGGTTTTTT TTTCTTTTTC 
    CCCCCCCCCC CTTTTTTTTT AAAAAATTTT TTTTTTAAGA AAAAAAAACC 
    TCTTTTTTTT TTTTTAAAAA AAAAGGGTTT TTTTTTTTCC TTTTTAGGGG 
    GAAACCACCT TTTTACCAAA AAATTTCAAA AAACCCCCCC CCGGGAAAAA 
    AAAAAAAAAA AAATTTTTTT TTAAAAA

AT4G29735.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G29735.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 190 Blast hits to 190 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G29740.1

Model type
Protein coding
Short Description
cytokinin oxidase 4
Curator Summary
It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description
cytokinin oxidase 4 (CKX4); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 2 (TAIR:AT2G19500.1); Has 4201 Blast hits to 4198 proteins in 819 species: Archae - 66; Bacteria - 2589; Metazoa - 17; Fungi - 1008; Plants - 315; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G29740.2

Model type
Protein coding
Short Description
cytokinin oxidase 4
Curator Summary
It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description
cytokinin oxidase 4 (CKX4); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 2 (TAIR:AT2G19500.1); Has 4206 Blast hits to 4200 proteins in 818 species: Archae - 66; Bacteria - 2585; Metazoa - 17; Fungi - 1008; Plants - 323; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink).
Link
InterPro Scan - TAIR