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Mutant Lines
GT14439

GT14439

CSHL Arabidopsis genetrap mutant lines

Original: GT14439

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14439

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 1565160 [Map]; Strand: c
- AT5G05270.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 154; Region: intergenic
- AT5G05280.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 287; Region: intergenic

CCTACTTTCT CCCTGATTGT ACCTCTGTAG TTTGCTGCTC CGTATCTGCT 
TAGTACAACA AAAGCAAAGT CACACTACAT CACAAACCAA TGACCAATCC 
CAAATCTTCT GTTTCACAAA ACGATCCATT GCAAGTGACT TCAATAGAAA 
TCAACAAAGT TGGTTCAATC AGCCAAGATT CATACACTAA GCTCAACAAA 
ATCTAGTCTG TGTCCTTCCA ATGTTGAATC CAAACGAGCA AAGCTGATTT 
AAATTGAGAT TAAGGAATTA CCATATTGTT CGGCCATATC AAACTCCAAA 
GTAAAAGTTT GATGATACAA AAGCAGGAAC TTGACAAGAG GAAAAAAAAA 
AATCCTCCTT AAAACACCCC CCCTTTCAAT TTTTTTTGTA GGGGGCCAGG 
GTTCTTAGGT AAAAACGGCG GAAATGGAAT CAGCGAGGGA AACAATAGCC 
AAGGGGGAAA CCCCCCAATT TCCGAAAAAA TACCATCTCG GAATATTTCC 
CACCAATTTC GATTTCCCCA CCTTAAGTTT CCCCCCTTCT TTACCTTCCG 
TCTAAAACCG GATCTTCCCC CAATCAAAAA AAAATTTTTT TAGGACTTTG 
ATGGTTTTGT CCCCTACCAA TAAAAAACTA AA

AT5G05270.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 361 Blast hits to 360 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G05280.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR