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GT14454

CSHL Arabidopsis genetrap mutant lines

Original: GT14454

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14454

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 840183 [Map]; Strand: w
      • AT4G01930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
      • AT4G01935.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -874; Region: promoter
    Flanking Genome Sequence: GT14454 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTGAACA 
    CTCTGTTAAT GAATGAATAA ATGGAATTAT AAAACAGTTT CTTCAAATAA 
    TATCATGATC AGTCATAGCA TGAAAAAAAA GCAAGATGAA AATGTTTTTT 
    GCCAACAAAA GCAAGATGAA ACAGTTTCTT CTGAATGTGA AAGCTCATGA 
    TCACCAGCTC ACCCTTTTCC CAAGACTCAT TTCTTTTATA TGTAATGCTT 
    GCAGCTTAAA TGGAGATCGA AGCCCTTACA TATGTGTTTA GTGTAATTTT 
    TTTATTCATC AAGATTGTCT TGACCTTCCA CGCGTCATAA ACATTAATCG 
    GCATGATCAT CGTGTTTCTC GAACTTCTCT TCTCGGTGTT GTGAATTCTG 
    TATGTGGAAT TTGTCACAAG AAGATGGATT GGACTTGTGG GGGA

AT4G01930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 2022 Blast hits to 728 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 2; Plants - 1926; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01935.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR