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GT14469

CSHL Arabidopsis genetrap mutant lines

Original: GT14469

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14469

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3248394 [Map]; Strand: c
      • AT5G10330.2 - [+] show detail - histidinol phosphate aminotransferase 1
        Distance: 0; Region: exon7 (CDS)
      • AT5G10330.3 - [+] show detail - histidinol phosphate aminotransferase 1
        Distance: 0; Region: exon8 (CDS)
      • AT5G10330.1 - [+] show detail - histidinol phosphate aminotransferase 1
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: GT14469 - 5-prime edge 
    CTTTATCCCT AATGATATTT CAGGTTTAGC CGGGCTTCGA GTTGGATATG 
    GAGCGTTTCC GTTGAGTATA ATCGAATACC TGTGGAGAGC AAAGCAACCG 
    TACAATGTCT CTGTTGCAGG GGAAGTAGCT GCTTTAGCAG CACTCTCAAA 
    CGGGAAATAC TTGGAAGATG TGAGAGACGC CTTGGTACGG GAAAGAGAGA 
    GACTGTTCGG GCTATTAAAA GAAGTTCCTT TCTTGAATCC ATATCCGAGC 
    TATTCGAATT TCATTCTCTG TGAGGTTACA TCTGGAATGG ATGCAAAGAA 
    GCTGAAAGAG GATTTGGCGA AAATGGGTGT GATGGTTCGT CATTACAACA 
    GTCAAGAGCT TAAAGGTTAT GTTCGAGTTT CTGCTGGAAA GCCTGAACAT 
    ACTGATGTTC TCATGGAGTG TCTTAAGCAA TTTTATTGAC TTCCCCATTT 
    GTTTGGGAAT TCTTAAAACA GCCACACAAA AAAAAAACGG ATTTTTTTCC 
    CCCCCTTTTT GGTTGGTTTC CCCTGGTGGA ATCCAGGGTT GGACAAAAAA 
    AAAAAGGA

AT5G10330.1

Model type
Protein coding
Short Description
histidinol phosphate aminotransferase 1
Curator Summary
Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.
Computational Description
histidinol phosphate aminotransferase 1 (HPA1); FUNCTIONS IN: histidinol-phosphate transaminase activity; INVOLVED IN: histidine biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: stem, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10330.2

Model type
Protein coding
Short Description
histidinol phosphate aminotransferase 1
Curator Summary
Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.
Computational Description
histidinol phosphate aminotransferase 1 (HPA1); FUNCTIONS IN: histidinol-phosphate transaminase activity; INVOLVED IN: histidine biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: stem, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35250 Blast hits to 35250 proteins in 2924 species: Archae - 1034; Bacteria - 25749; Metazoa - 263; Fungi - 394; Plants - 462; Viruses - 0; Other Eukaryotes - 7348 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10330.3

Model type
Protein coding
Short Description
histidinol phosphate aminotransferase 1
Curator Summary
Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.
Computational Description
histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink).
Link
InterPro Scan - TAIR