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Mutant Lines
GT14478

GT14478

CSHL Arabidopsis genetrap mutant lines

Original: GT14478

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14478

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 1035712 [Map]; Strand: w
- AT3G04000.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: exon1 (CDS)

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGAG 
CTCCTAAAGG GAACCTTTAA AATTACAACT TGGGGCATCA TTTTTTTTGT 
CATTCACGCG TAATAACCAC AATTTATAAA TTTGAATAAT ACCTTATTAC 
CGATTTGAAA AAAAAATAGA TAATATGCAT TACCCGAGGA AATCAAGTGC 
TATTTAAACC CCTCCTCGGT TTACCCCAAA ATATTCAAAG CCCTAGAAAG 
AACACAGATT CCATTTTCTC TAAACGCTCT CCCACTTTTT CACTTTTCCC 
GATTCAGAGT CTATTTTTTC TCCACCAGCC ACACAAAGAG AATTCTACGT 
TTGAGCTCTC TATNCCGCCT CGACAAGNCT TATGCTGTCA AATTCGTAAG 
CAAATTGAAT TGCTGAAAAT GTTTTTAGAT TTGTCTTAAC CTGTCAATTC 
GTATGCATTT TGAATTGCTC AAAAGTTTAG ATTGATAGGA CGTGTTTTCG 
TTGTGTGATT GTCTTCTAGA ATTCACACAC TCACTTTCTC AAATCTTAAC 
TTGTATTATA TATAGCACGG TAACAACATT ATACAACTAA CCAATTTTAT 
TAACTTTAAA ATTATTTAGA ACACACATGC ATAGTTGCAT ACTATAAAAC 
TTAGATCAAG ATTATGTCAG CCATAGTT

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 833563 [Map]; Strand: w
  - AT3G03500.1 - [+] show detail - TatD related DNase
    Distance: 0; Region: intron3 (CDS)
Flanking Genome Sequence: GT14478 - 5-prime edge
```
GACCGTTACC GACCGTTTTC TCCCTAGTTG TAATGAAACC CCTTTTGGCT 
GACATCTCAT TAGATTAACA TCTTCATAAA TTTAATGTGT GTTTTGCAGA 
TTGGTTTAGA CAAAGGTCCC TTAGCAGGAG GAATTGATTA TTCAGACCAG 
CTAGTC
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 1035758 [Map]; Strand: w
- AT3G04000.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: exon1 (CDS)

TCCTACTTTA TCCCTGCGCG GAAGTCGCCG GCAAAAGTCC ACGTGTCATT 
GTGGTGAAGG CTGATATCTC AGAGCCGAGC CAGGTAAAGT CGCTTTTCGA 
TGAGGCAGAG CGAGTCTTCG AGTCGCCGGT TCATATCTTG GTTAACTCAG 
CGGCTATAGC CGATCCTAAT CATTCCACTA TCTCAGACAT GTCAGTAGAA 
CTTTTTGATC GCATTATCAG GTTAATTTTA AGAAACTCAT TTATTATAAA 
GATTGTTTCA TTTAGTTATT TTGCAACTCT ATAACGTGAA TTTAATTAGA 
TAGTGATATT AATTAGATTT GTTGTTTGAT ATAACAGTGT GAACACAAGA 
GGTGCGTTTA TTTGTGCTAG AGAAGCTGCG AATAGGCTAA AACGTGGAGG 
CGGTGGCCGG ATAATTCTCC TCTCAACATC ACTGGTTCAA ACCTTAAATA 
CAAACTATGG CTCATACACG GCTTCAAAGG CAGCCGTAGA AGCCCATGGC 
CCAAGATTCT TGCAAAAGAG CTCAAAGGAA CATAGAT

AT3G03500.1

Model type: Protein coding
Short Description: TatD related DNase
Computational Description: TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related, conserved site (InterPro:IPR018228), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT5G17570.1); Has 10176 Blast hits to 10176 proteins in 2674 species: Archae - 185; Bacteria - 6995; Metazoa - 308; Fungi - 266; Plants - 100; Viruses - 0; Other Eukaryotes - 2322 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G04000.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03980.1); Has 120024 Blast hits to 119806 proteins in 3618 species: Archae - 979; Bacteria - 79335; Metazoa - 5674; Fungi - 6028; Plants - 2843; Viruses - 19; Other Eukaryotes - 25146 (source: NCBI BLink).
Link: InterPro Scan - TAIR