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GT14487

CSHL Arabidopsis genetrap mutant lines

Original: GT14487

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14487

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 847755 [Map]; Strand: w
      • AT3G03540.1 - [+] show detail - non-specific phospholipase C5
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14487 - 5-prime edge 
    TAAACAATCG GTTTGGCTGT GTTGCACCCG GAACCGACGC AAACCACCTG 
    TCCAATACAT GAAATTTGCT ATAAAGCGGG ATTTTGCTAG ACAACCAATT 
    TCCAATTCGG TTTTAGTTGG ATGAACCGAA CCGTTATACA GATGTAATTT 
    ATACAGGTCA AACGGTCTCA CCTATCACAT ATAGCGAAAT TTTGAACCAA 
    TTCCTTGTAA ACCGGCAAAG CGTCCGGTTT AAATCCGTTC ATAACCGCAG 
    AAGACATCCC TTTC

AT3G03540.1

Model type
Protein coding
Short Description
non-specific phospholipase C5
Curator Summary
Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions.
Computational Description
non-specific phospholipase C5 (NPC5); CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2077 Blast hits to 2037 proteins in 379 species: Archae - 32; Bacteria - 1720; Metazoa - 0; Fungi - 127; Plants - 154; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR