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GT14508

CSHL Arabidopsis genetrap mutant lines

Original: GT14508

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14508

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18390650 [Map]; Strand: w
      • AT5G45380.1 - [+] show detail - solute:sodium symporters;urea transmembrane transporters
        Distance: -474; Region: promoter
    Flanking Genome Sequence: GT14508 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTGTCACACT 
    GACATGTAAG TATGTAACAT GTCCGTTGAC ATATATAATG TTTTCCTTTT 
    TGTTAATCGT GCTTGTCTTT AGGTACAATG ACTTTTTAAG TGTTCTTGAT 
    TCCTTTTATC TAAGATTGAA TTTAAAATAT ACGCTTCTTT GCCACCCAAC 
    TAAAAAACGT ATTGAAACAA CCAATTCTTA AAATAAAAAT AGAGATTTGT 
    TTCCATAGTT GAACTTGCAT TACCAAAAAA GAGGCGAAGT AATTATTTTG 
    ACTTATTTAC CGTTTAAAGA ATCAATGTTT GAACTCGAAA AAATTGTATG 
    ATTTGTCAAG TTTTTGTCTG ATATTAACTA CGTACAACGG TACAAGTATC 
    CTTTCTTTAC CTTTTCTTAT TTATTTACCA GTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1557056 [Map]; Strand: w
      • AT4G03505.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TA...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14508 - 5-prime edge 
    CCTACTTTAT CCCTGCTATA GGCACATATT CACTGGCGAG GTCAAACAGA 
    TCAGAGAATC TGATATTGGT AAAGAACTCT GGCACATTTT CGGTGTCTCC 
    CGTAGCGGGC GTAGCTGCTT CTCCTTCCAC TTGAAGGAAA CCTAGTGCAC 
    GGAATACGCG TACGATTCCG CGCTCTATTA GATTAATGGG GGCGTAACTT 
    TGTTTCGATT GGTCATGATA CACACCCGTT GACCTCTGTG CCTCAATCCT 
    ATCAAGACCT GCTTCAGAAC TGTCCATCCT CAATCCTGAA ATCATCAGAC 
    AAACACAGTT TTAAGTTCCC TAACCAAATG TCAACGATAC CAAGAAGAGG 
    AAGGAGAGAC TTACGAAATG TAAAGGAGAT CAGAAGTACA AGAGGAGTTC 
    CTGAAGTCTG ATGGAAGAGA GAGACTATAT TTTCGTCCAT TTATAAAACT 
    CCATCTGTGT CTCAAAGCTC AGAGTAAGTT TAATCAAAGT CAATGCAGAA 
    ACAGAGGTAT GGTCATTTTT TAATCCGAAA TAAACCTAAC ACCTCGATTA 
    CAGAGTTGTA GTCTTTACTC TTTCGAGTGA TTGGGGTAAT CTAAAGTCAA 
    CTTTATAAAA TAAAATAAAA AAAACTACGT AAATTTACAT ACCCCAATAT 
    AATGCATTTG AAAAGCTTAG TTTTGATAGT TCTACCCATG GGCTGAATTA 
    TACAAACACA TGCAGATCAG GCCTATTAGG TTGGCCTTTT CTGTAGACGA 
    CACTATCCTC CAGATCAAAT CTACACAAGA TTTAACCCAA CACAAACGAA 
    CTCCTCAACA TT

AT4G03505.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G45380.1

Model type
Protein coding
Short Description
solute:sodium symporters;urea transmembrane transporters
Computational Description
DEGRADATION OF UREA 3 (DUR3); CONTAINS InterPro DOMAIN/s: Sodium/solute symporter, subgroup (InterPro:IPR019900), Sodium/solute symporter (InterPro:IPR001734); Has 9388 Blast hits to 9377 proteins in 1702 species: Archae - 173; Bacteria - 6389; Metazoa - 719; Fungi - 340; Plants - 51; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink).
Link
InterPro Scan - TAIR