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GT14513

CSHL Arabidopsis genetrap mutant lines

Original: GT14513

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14513

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19255248 [Map]; Strand: c
      • AT1G51850.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT14513 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAACTTAGA 
    CCATCCCACA GAAACAGTTT GGGGACACAT GGATCTCCTT GCCAACTAAT 
    TCTACTAATT CCATAAGTAT CTTGAACATT CTTGATAGCA TCAACTGTAA 
    AGCTTGGTGA TATCAAAAAT CAAAACATAA ACACAAACAA AAGTTGTAAA 
    TAAGATTCAA TAATGTAAAG AATCGACATA CCGTCATCTT CATTAGTCTC 
    CATCTGCGGG AAATCAATCA CGGTGAAAGC CTCGATAGCA TTAAGTAAAG 
    GTGGAAGGGT AGATTTAAGT GTCTTCACAA CCTGCAAAAG GCATGCACCT 
    CCATCGCATT GCTCTGGGAT TCGGTCGTAT ATGGTTTCGG TTTTTAGTGG 
    TTTAGGACTA TAAGGTCCAT ATGTATATAT TCCATTCATC GTCACATTGA 
    ATTCCCTAAG TCTGAAGCTC TGCAAAGTGC ATGTAGGAGT AAAACTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 738039 [Map]; Strand: w
      • AT1G03080.1 - [+] show detail - kinase interacting (KIP1-like) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT14513 - 5-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATCTGGTT 
    CCTACTTTTT ACGTTGTGAA GAAGAAGAAT TGTTTAGGTA AGCTTTTAAA 
    TGACGATATT ACCCTCCAGT ACAGTTCTCA CAGATGTTCT GTTTCATTAT 
    TTTAATTCAC TTGTTGCGTG ACTTTGCCTC CTTGGGATCG CCTTCGCTGC 
    CAACTTAAAA AAAAACACGA CTTT

AT1G03080.1

Model type
Protein coding
Short Description
kinase interacting (KIP1-like) family protein
Computational Description
kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G51850.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 171252 Blast hits to 122960 proteins in 4539 species: Archae - 111; Bacteria - 14101; Metazoa - 44553; Fungi - 9964; Plants - 82714; Viruses - 410; Other Eukaryotes - 19399 (source: NCBI BLink).
Link
InterPro Scan - TAIR