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GT14514

CSHL Arabidopsis genetrap mutant lines

Original: GT14514

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14514

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8921271 [Map]; Strand: w
      • AT2G20680.1 - [+] show detail - Glycosyl hydrolase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14514 - 5-prime edge 
    TGATGGTTGG AACTCTTATT GGTTCATGGA CCATGCTGTG AATGATCATA 
    GTAGACACCG TGTCGGAGCT ATGCTTGAAG CTGGAGCTAA AATGGGTCTC 
    ACTGTTTGTA GAACATGGGC TTTTAATGAT GGAGGCTACA ATGCTCTTCA 
    GATCTCTCCT GGTAGATTCG ATGAACGAGT CTTTAAGGTA TCTTTTTTTT 
    CATCCTCACT CGA

AT2G20680.1

Model type
Protein coding
Short Description
Glycosyl hydrolase superfamily protein
Computational Description
Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR