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GT14522

CSHL Arabidopsis genetrap mutant lines

Original: GT14522

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14522

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22367482 [Map]; Strand: w
      • AT3G60520.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -4903; Region: intergenic
      • AT3G60530.1 - [+] show detail - GATA transcription factor 4
        Distance: -5733; Region: intergenic
    Flanking Genome Sequence: GT14522 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAAAGCA 
    CAGAACATGT GTCGGACATA AGAAGTACAG AAAACACAAA CGGCGTCGTA 
    TAAGCTAGTA GCCTTTTGGA ATGGTGAGTT GATGTGCGTT GGAAATATCC 
    GGCAAAGCCA AAATTTTGAA TTGGGCCGTC ATATCTAAAT CATAAGCCCA 
    TTTAGAAAAG ATCTATCCAT TATGGACGTA AGTACAGTAT GTAACAGATG 
    ACAACGCCGT ATATTCGATC GTACATCAAA TAAAAGTAAC AGTCCATGTT 
    CATAACGCAT ACATTGATAC TCCATAACAT CATTCACGAA TTTTTCTTTG 
    TTTTTGCTAA AATACAACTT TTTACTGAAT CAACTTTTAT TACGGGACAA 
    CCCAATAATA CTCTGCAGGT TAATTTATGA TTAATCAAAT CAATTTTTTT 
    GTACGTTAAG GTTGATTAAT CAATTTTAGA TTTTTCTGAG ATTTTTTCCT 
    GGAATATCTA TCGAAGACAG AAGAATTGAT GGTGTCAATT GCTTACTGAG 
    GGAGATGGTG ACAGGTGGAT GTGAGTCCCA CTCCCACAAA GAATCGGGTG 
    AACGGTCGCT ACTATTTGGC CGGACCCATT TCATCGCCGA TTCGAGCCAC 
    GAAGAGACAC TACAAGAGAA CAAAGTCTTT TTCGACAACT TTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22367566 [Map]; Strand: w
      • AT3G60520.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -4987; Region: intergenic
      • AT3G60530.1 - [+] show detail - GATA transcription factor 4
        Distance: -5649; Region: intergenic
    Flanking Genome Sequence: GT14522 - 5-prime edge 
    TGTCCCCCAA GTGGTCGTCG TTGTCGCATT CAATGGAGGT TGGGCCCCAC 
    GGCCCATAAT TATATTCACA ATACAAACAG AAGCCCATTT CACATCACCT 
    TCTCGCTATC TTGTTGTCTT CAAAACTGTT GAACTTGACG TGGAAACAAA 
    CGAAACCGAA AAAGCTTGCG TGGCTAAATC ATTGACGTGT ACTTTTAGTA 
    CTTCACTGGG GCAAGTCTTC CGCTGCAGAT TCCAAATATT CAATGAAATA 
    CATTCGTTCT AACTGGTTTT ACTACTAAAT TCTATGCTTT GAAATAAATC 
    TAGTTTACAC CACAATGGTT TTATTTCACG GACGTCAATA AAAGTCGTGG 
    AATCAATCTT TTATTTTGTG TTTACTACAA CATAATCAGA TTTTTTGTTT 
    CGTTTTGTTC TGGAACGGTT CTAAGCAAAG AATACATAAT CAGATTCTTA 
    TTACTCCGAT GAATTCAAAA AGTAATATGT AGCCATTTAT GTTATAGCAC 
    AGGAACGAAA TAGATTATTG AAAAAAAAAA ATAATTTCCG GAATGGTTTC 
    AAATTTTTAA CATTTCCA

AT3G60520.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60530.1

Model type
Protein coding
Short Description
GATA transcription factor 4
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR