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GT14524

CSHL Arabidopsis genetrap mutant lines

Original: GT14524

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14524

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23071999 [Map]; Strand: w
      • AT5G57015.1 - [+] show detail - casein kinase I-like 12
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14524 - 3-prime edge 
    TTCATAGAGC AGCTGAGGAT GTTTCGTCTT CACATTTTCC TGCCAATAAG 
    ATAGAAAAAT TACTCTCAGT ATTGCACCAA AGGCCTTGTA GCACCATAAA 
    TATGAAAGAA GCTTTGATGG ACAAGTGAAG ATTGGACTTT TGTACCAATT 
    ATCATCAATG TTGATCTAAT TCAGTAACTC AATAAATG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26789771 [Map]; Strand: w
      • AT1G71015.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14524 - 5-prime edge 
    CTACTTTATC CCTGGACCGA ACCCTTCTTG GAGTTCTCTC TTTCCATGTT 
    CTGTCACATG GGTTTTAAAT GATTTACTCA AAAAGATTCT AACTTTGATA 
    CCTAAAACTA AGTAGAAAAC TGAGGAATAT AATACCTTGG AAGTTCAACC 
    ATGAAGTAAA TCCTTTTGGA TTCCAAGTTT TGGTGAGGCT CCAAGGGCTT 
    TGCTCTGATT CCTAAACGCT TCACTGCTTC GGATTCCAAG AGAACGTGGC 
    CTGGAAAATC TTTAACCACT GTACCAGCTT CCACAGGCGT TTTCAGTTTG 
    AAACTCTCGC CATTGATGTT CATGATTGTC GCTGTTTTCT TGGTTCCCAA 
    GCTATTTCCC ATTTTGGTGA ATGATGTTGT GTAAAATGTT AGTATCTTTT 
    AGGTTCACAA ATGAGATGAA AAAACTTTGT AGGTTGGTGT CTATTAAGAG 
    CTCAGTAGTT CAAGGTGGGT GTTGTGTTAG ATCAGATCAT TATAGATTTT 
    GGATTTGATT TATGGTTGGT TGCTGATGAT AGTGAACCAT TTCTTGGTCA 
    ACAAAATGCC AAAATCTTGA AAATTATTAA AACAATGAGA AGACAAAAGT 
    TACGTCGCAT TTCACTATCA ATCTTGAAAA GACCAATAAC AACCCAAAAT 
    TTATGCTTAA TTTTATAAAT AGAAATGGAA AAT

AT1G71015.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57015.1

Model type
Protein coding
Short Description
casein kinase I-like 12
Computational Description
casein kinase I-like 12 (ckl12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR