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GT14526

CSHL Arabidopsis genetrap mutant lines

Original: GT14526

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14526

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16768574 [Map]; Strand: w
      • AT4G35240.2 - [+] show detail - Protein of unknown function (DUF630 and DUF632)
        Distance: -1487; Region: intergenic
      • AT4G35250.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 2597; Region: intergenic
    Flanking Genome Sequence: GT14526 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACT 
    TCTGTGTTCT CTTTATTCCT CCTATAAACC CTAAATTCAA TCCCCTTGCA 
    TTAATGACCC TCGCATTAAT AACCATAAAT ATATCTTACT CACCAGTACT 
    TTATTCCAAA TTCACCACTA AACAGCAGAG GAATAAAATA GTTGTATGGA 
    TTATACTAGT TTTAGATTTG TTTCTGTATG CGTTAATAAT GCATAACATT 
    ATCTATCACT GGCATATACG ATTGCGTTAA GTATAGATAA ATGATCAGAA 
    CTTATCAGTA TTTGCCCAAA AAAAAAAAAA AAAAAATTTT CCCCCCTAAA 
    GGGGGGTTTT TTCCCCCGGT TTTCCAAAAA AAACCGGGCA TTTTAAAAAA 
    ACCCTTCCTA AAATGAACCC TTTTTTTAAA AAAGGGGAAA ATTTTCGGGG 
    AAATTTTTTT TTTTAAAATG GGAAAAAAAA CCCCTTTTTT CCCCGGGGTT 
    TTTTTTTAAA AAAATTTTAT TTTTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3116303 [Map]; Strand: w
      • AT3G10110.1 - [+] show detail - Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 fam...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14526 - 5-prime edge 
    GAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAT 
    TCTGATGAGA ACTCTACCCA GATTCAACCG ATCCGGATGC CAACCATCGA 
    GGAGATCCGA GCTCAAGAGG TTTGGAACAA CTGCGCCGTT CGCGCTGTTA 
    CTAGTGGAGT CATGGGTCAG TTCAAATATC CTCTCTTTCT CGACCTATAT 
    TGCTCCATTG CTCTGATTTT CCAAAAATGC GAAAAGCTCT AGGTACTTTG 
    ATTGGTTTGA GAATAGTGAA ATTGGTAAAG TCTTTAGCTT TCTAATAGTG 
    ATATGCTTCT GAGCTGGTTA TTGAGTCACT TTCAGATTGC ACTTAATAGT 
    CGGATTTGGT TAGGTGAATT GATGATGTGA AATCTCAAAT CGAATCTATT 
    TTCTATAAAT ACTCTAAAAG GTGTAAAGCT ACTAATATAA ATGCTCGCCG 
    GTTGTAGAGT TGATATGACA GTTAGACATG TGAAGGATAT TCAATTGATT 
    TGGTCACATT CTCTGTGAAT TGTGGTGTAG GAGGAGGACT CGGGTTGATG 
    ATGGGTTTGT TCTTGGGGGC ATTAGATAAT CCTATTACGC ATGATACTAT 
    GACGGCTAGG CAGCAGTTTG TGTTCACGGC AAAACAAATG GGGCAAAGGA 
    GTTGGAATTC CTGTAAGACA TTTGCAGTTA TGGGTTTGGT TTTCTCTGCT 
    GCAGAATGCA TTGTCGAAAA GGTAATACCT TGTT

AT3G10110.1

Model type
Protein coding
Short Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Computational Description
maternal effect embryo arrest 67 (MEE67); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrial inner membrane, chloroplast, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT1G18320.1); Has 680 Blast hits to 680 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 258; Fungi - 229; Plants - 130; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35240.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF630 and DUF632)
Computational Description
Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1).
Link
InterPro Scan - TAIR

AT4G35250.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR