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GT14544

CSHL Arabidopsis genetrap mutant lines

Original: GT14544

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14544

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26238840 [Map]; Strand: w
      • AT1G69750.1 - [+] show detail - cytochrome c oxidase 19-2
        Distance: 1269; Region: intergenic
      • AT1G69760.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 420; Region: intergenic
    Flanking Genome Sequence: GT14544 - 5-prime edge 
    TCCTACTTTA TCCCTGGTCC GGGAGCTGGT GGAACATAGC GTCAGTGGGA 
    AATCGCATAA GCGGACTGTG TACCGACAAT TTCATAATTT AAACGAGGAT 
    GCATTTATAT AACAGAATTT ACCCAAGTCA TCTGATCAGA CTATATTGCG 
    ATTATCGAAT AACCTACCAT TCATCTTAAT TCAAATGTAT ACATAAATAG 
    GATAAGTTAC TACAACAACA ACTTTTTTAC CAAAAAAAAG AAAAAAAA

AT1G69750.1

Model type
Protein coding
Short Description
cytochrome c oxidase 19-2
Computational Description
cytochrome c oxidase 19-2 (COX19-2); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 19-1 (TAIR:AT1G66590.1); Has 290 Blast hits to 290 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 106; Plants - 52; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G69760.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26920.1); Has 51 Blast hits to 51 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR