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GT14545

CSHL Arabidopsis genetrap mutant lines

Original: GT14545

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14545

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18587005 [Map]; Strand: w
      • AT3G50120.1 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 0; Region: exon1 (CDS)
      • AT3G50123.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -969; Region: promoter
    Flanking Genome Sequence: GT14545 - 5-prime edge 
    CTTTCTCCCT GCCCCAGAGT GTTGTGTCAT CATCTCTATG TGCTTGTTCG 
    AGCTTGTCTG TGATCGAGAT CACCCAATCG TCTCGTGAAT CTTTTGGACT 
    CTCTTTGATT ACGTAGATAG CGGGATCGGA TTGAGTTTGC TGGTTGTTAT 
    GAATGTTTTG ATCTTGATCG GATCTGGTGA TTTCGGGTAA ACCGGGGAGG 
    TTTTGATCTT GATTAACCAA TACGGATTCT TGGTTTTGTG TTTCGAGTTT 
    TTCGCGGATC TTAAGGGTGA GTAAGTACCA GCTCAACATG TCTTTGTAGA 
    AGACAGCCAC CATTTTTTTT GTTGCTTGAA GCTTTTTTAA GAAAATGAGG 
    GAGTGAGAGA GAAGGAAGTA TATGTGAATG ATTTGAAGAT ATAATTGGTT 
    ACTTATTGTA CTTATGGACC CAACTGATCT GTAATGACAA CAACCATAAT 
    TAGATATTTA TAAACACACA CACACACATA TTAATATCTT TGAAGAAAAA 
    AGTAACAACT AAAAGTTTAT ATATCTTACC TAATTATTTT AACTACTAAA 
    ATATACAAAT TAATTTGGAA TCGTGCGGCT TAAAAGGGTA ACATAGAATA 
    GAAAATATGC CTTTGTGTTC TATAATTTAC CATATATCCG ACCATTATCC

AT3G50120.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50170.1); Has 1189 Blast hits to 1046 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G50123.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR