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Mutant Lines
GT14560

GT14560

CSHL Arabidopsis genetrap mutant lines

Original: GT14560

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14560

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 148260 [Map]; Strand: c
- AT4G00335.1 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon5 (3UTR)
- AT4G00335.2 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon5 (3UTR)
- AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
  Distance: -554; Region: promoter

TGAACGGTAG AGGATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATT 
CAAAATCATG TCCACTCTTG TCTTGATCCA TGATTCTATC TTAGCAATAT 
TGGTTAATGC CCTGATCTGG GAATCATAAT AAGCATGATT TTGTTTGTTT 
GTTTGGTTAA AGAAAGAGAG AGATTCTATT AGATATGGAT ATAGTATAAT 
TCCATAGTCT AAAGAGAAAC TGAATATTCC AAATAGTAAA TTGATCCACA 
TGCGACTAGT CTTGTCGTGT GTAAGATATT AAAAAGAAAA TGATTCTTTG 
ATTAACACCT NTTTGTCTGC TGCATAAAGT AATTAATTAG AAATAATTAA 
GAAAAAGGTT AGGAATCATT TAAGAAGAAG AGAAAAAAGA TGTCATGGCT 
TTGACTTCTA GCCACTTATG TCTGCCACTG CCACCTCCCT CTTCTCAATT 
CCTATTCTGC CCTTCTCTTT CTTTTAGTTC CTATCCTGCC GGTGTTGATG 
AATGAGGGTT AATATAGTAA CTTTGGCGTT AGGAACTATA GTTCCAAAAC 
CTTTTTCTGA ATGAATTTAC TTTTTGGAGG TATGAAGTCA CAGCTTTTAC 
AGATTTTATC TTGCAAAAAT TCTCTCCACA TTTCAAACGT CTAATAGTTA 
AAGAGAGCTT TTGTTCTTTT TTTCCCATGT CTATCAGTAT CACCACCGAG 
AAAATATCAT CAACACCACC AACCAAACAT TAACCCACCC GAGAGTACTC 
AATGCCATGA CTACTTA

AT4G00335.1

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 5425 Blast hits to 5419 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1535; Fungi - 417; Plants - 2568; Viruses - 6; Other Eukaryotes - 899 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00335.2

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00340.1

Model type: Protein coding
Short Description: receptor-like protein kinase 4
Curator Summary: Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description: receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link: InterPro Scan - TAIR