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GT14561

CSHL Arabidopsis genetrap mutant lines

Original: GT14561

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14561

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1975067 [Map]; Strand: w
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14561 - 3-prime edge
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCAGC CACATTTTAT 
    GACTTTGGAA GATCTTGATT ATCTATTTTC AAACAAGAGC TTTTTTGGAG
    AAGAAGAAGT GTCCAATGGA ATGCTTGTAT GGTCTCGAAT GCGTCCATTT
    CTTGAAAGGC CAGATGCTTT GCCAGAAACT GCTCAAGGGA TAGAAGAAGC
    TACATTGGCA ATGAAAGGTT TGGTTTTAGA AATCAATAGA GAGAAGAGAG
    CTTATTCTTC TGGTATGGTC TCTAAGGAAA TTAGAAGAAT CTGTCCGGAT
    TTTGTCACTG CATTTGATAA GGATTTGTCT GGTTTAAGTC ATGTACTTCT
    TGAGCTTCCT TGTGGTTTAA TTGAAGATTC TTCAATAACT TTGGTTGGTA
    TTCCTGATGA ACATTCTAGT AGCTTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1975211 [Map]; Strand: w
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14561 - 5-prime edge
    GGTGATCAGA TTGTTCATAA CGGATGATGA AGATCAATGT ATTTATTCCC 
    CTGGAGACTC CCACCGACCA ATCCCTCATT CTGACTGAAG TGAAACCAAA
    TTTGAATCTC ACCACTGACA TGAATTGCTT CATTGAGTAA CCTAAAGTAA
    AACGCAGATT ACGAATTAGA GTTAGCATAA TCCGATTCTT ATTCTCACAA
    TCCTAATAAA GGAAGAACTC AAACAATGGT CAACGAACTT TGG

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06440.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR