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GT14570

CSHL Arabidopsis genetrap mutant lines

Original: GT14570

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14570

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1529386 [Map]; Strand: c
      • AT4G03445.1 - [+] show detail - MIR447A; miRNA
        Distance: -1016; Region: intergenic
      • AT4G03450.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 60; Region: intergenic
    Flanking Genome Sequence: GT14570 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCGAA 
    TCAACATAGC AACAGAAGCT CCATTCTCTA GCTCTAGAGA GTCTCCACAC 
    AATATATTAT GTATTTTGAC AAAATAGAGT ACATGGAATG ATGGAAACCA 
    TAAATAAAAA CTCATAGATA AATCACGAAA CACCGAAAAG CCAATAACGT 
    TTAAACAACA TCTTAATCAA ACAGATGAAA TGATATTATT TCTTTAAAGA 
    CATTTTTTAT TTTACCTTTC GACTTAGTTC GCGACATAAA GATGGACGGT 
    CTCCTGCT

AT4G03445.1

Model type
miRNA
Short Description
MIR447A; miRNA
Curator Summary
Encodes a microRNA that targets several 2-phosphoglycerate kinase-related family members. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UUGGGGACGAGAUGUUUUGUUG
Link
InterPro Scan - TAIR

AT4G03450.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 22492 Blast hits to 11630 proteins in 488 species: Archae - 24; Bacteria - 1675; Metazoa - 12211; Fungi - 1719; Plants - 2554; Viruses - 43; Other Eukaryotes - 4266 (source: NCBI BLink).
Link
InterPro Scan - TAIR