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GT14583

CSHL Arabidopsis genetrap mutant lines

Original: GT14583

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14583

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14583 - 3-prime edge
    GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG 
    GGGGGGGGGG GGGGGGGGGG GG
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2105747 [Map]; Strand: w
      • AT1G06850.1 - [+] show detail - basic leucine-zipper 52
        Distance: 0; Region: intron1 (CDS)
      • AT1G06850.2 - [+] show detail - basic leucine-zipper 52
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14583 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCG GGCTACTATC 
    ATTGCAATTC GTGAATTGAA TTCTATATAA GAGAAACAAA TTCGAAGAAG
    AAGGACTTTT TAGCGCGTTT GGGATCGATG CTCCAAAGCT CAGAGAGTTT
    TTCAAGAGGC ATAGCTTTCT TAGCGTCCAT GATTTCACCT GAATACATGG
    CGCATCCAGC GTCAACGGAA TTGTTGTGAC GGTGGCGAGG ACGAGAGGAA
    GAATGAGGAG GATTAGCAGC ACCGGAAACA GAGTTGGAGG AGAGGGAGGC
    GTTTGGGAAG TGATTAGAGG TGAGGCTATC GACGTCGATG AAAGAAGAAA
    AGAGATCGTC GTCGGGGGAG GTCGGCGGAG GGAAGTGGTG CGGCGGAGGA
    GAGGGGATCC ATGAACATGA ACATTGACAT CGTCGGAGCT AGATCGACGG
    TGGAAGGAAG AAGACGGAAT CAGATCGGCA TTAGGACTGG GATGTGAAAT
    TGGATCGGAG GGGATGATAG TGGCGGGCTT GGTAGTGGTG GTGGAGGATC
    TGATTTCTCC ATTATTTCAG GTGGATTTTG AGAATTTGAG AGATGGAAGT
    TTTGTGTGTG TGAATTATTA

AT1G06850.1

Model type
Protein coding
Short Description
basic leucine-zipper 52
Computational Description
basic leucine-zipper 52 (bZIP52); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40620.1); Has 1688 Blast hits to 1688 proteins in 185 species: Archae - 0; Bacteria - 22; Metazoa - 232; Fungi - 142; Plants - 1216; Viruses - 2; Other Eukaryotes - 74 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G06850.2

Model type
Protein coding
Short Description
basic leucine-zipper 52
Computational Description
basic leucine-zipper 52 (bZIP52); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR