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GT14593

CSHL Arabidopsis genetrap mutant lines

Original: GT14593

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14593

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 571818 [Map]; Strand: w
      • AT4G01390.1 - [+] show detail - TRAF-like family protein
        Distance: -223; Region: promoter
    Flanking Genome Sequence: GT14593 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATC 
    AATATTGATG CTTTGTTCAA TTACCAAAAA CAAAAAAAAA AAGGTTTTGT 
    TCAATTCAAA AAAGGTGGGG GGCAAACCAG AGGGTTGGGC AAAACTGGGG 
    TTCCCAACAA AAAAAAAAAA CCACCTTTTG CCCTTGTAAA AAAAACCTTC 
    CTTTTTCAAA AAATATTTGT CCAAGTCTTT TTCCCCCTAA AAAAAATCGG 
    TCCTAAATCT TTTGCGCTTT TTTAAAATGC CCCACCCAAT CTCCTTGGAG 
    GGAAAAAACA AACCCCAGGT GGGGTCGGAG AACCCCTTTA AATCATTAGG 
    AGTTTCAGGT TTAAAAAATT TC

AT4G01390.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT4G00780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR