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GT14605

CSHL Arabidopsis genetrap mutant lines

Original: GT14605

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14605

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108317 [Map]; Strand: c
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: intron1 (CDS)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT14605 - 5-prime edge 
    GTGGTGTGCT TATCATAACG AATCAGACAG ACAAAAAGTG TCTGGATCCG 
    TAGAGCAAAG TGTTGTCGTG TCTTTGACAA AGTTCTTTGT TTGCCTAAAC 
    CAATTTGTTC ATCCGATAGA ATGAATTGCA TTCCGTTGTT ACTATCATCC 
    AAACCGGAGA TGTCAAGCCC TAACCCTCAA GTAGTATTTC TTAGAGAGCC 
    ATGAATTGTT TGTTTAGATC CAATTAGAAG AAGGTTTAGT TGACTGTGAT 
    GATTGTTTGT GTTTTTGGTG GCAGGACCAG GAGGCGCAGA GAGGGAGGAT 
    GCAGGAGATA GATCTTAGTG TTCACACTAT AAAGTCCCAT GGAGGAAGAG 
    TCGCTTCTAA ACACAAGCAC GATTGGATCA TACTCGGCAT CTTGATTGCC 
    ATCGAGATAG GGTTGAACCT CATCTCTCCT TTCTACCGCT ACGGGGGAAA 
    AGACATGATG ACTGAC

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR