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GT14620

CSHL Arabidopsis genetrap mutant lines

Original: GT14620

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14620

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21809351 [Map]; Strand: w
      • AT5G53730.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: -541; Region: promoter
    Flanking Genome Sequence: GT14620 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAAAA 
    ATATATATTT TGTTCAACAA CTTTCCTTCT TTATCATTTT CATACCGGTC 
    TAATCATCTA AGTCTTCAAC TAACAAAATG ATCGATACTA TATAATGGAC 
    TTATGCTTTA TTCTATACAC ATCTTAGGTC TTTAATTATA TATGGATCTA 
    TATCGGTTTC TTCTCATGAC ATGTTATCTT TTAACTTTGG GTGATATCAA 
    AACTTACCAT GCACGATCTC ACAAAACATT AATCATTTGA AGTTAAAGAA 
    AAACGCAAAG TGTGCAAGAA AAAGAAGCTT TTCAAGACAT TTCAAAGTCT 
    CACGATGTGT TAACTTTATT GATTATTTGG TGTTTTCCTT AACTAATCAA 
    GCATGTATAA TAATATAAGT AACTAAAACG TTCACGCAAA TATATACATA 
    AAGCAAAAGA ACGACCGCAA GAAAACAGAA GTCCATTTAT CACTAATCCA 
    ACGGCCAATA TTTTCACACC TTCACCAAGT AACAAACTAA GTCAAAAAAG 
    CATTACTAAA GACACAAAGA TAATTGCCGC TTAAGTGCTT ATAGCTTTCT 
    TTCTTCACTC TTTATTAACC CATTCACCTT CTC

AT5G53730.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G44220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR