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GT14621

CSHL Arabidopsis genetrap mutant lines

Original: GT14621

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14621

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21809349 [Map]; Strand: w
      • AT5G53730.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: -539; Region: promoter
    Flanking Genome Sequence: GT14621 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAAAAAT 
    ATATATTTTG TTCAACAACT TTCCTTCTTT ATCATTTTCA TACCGGTCTA 
    ATCATCTAAG TCTTCAACTA ACAAAATGAT CGATACTATA TAATGGACTT 
    ATGCTTTATT CTATACACAT CTTAGGTCTT TAATTATATA TGGATCTATA 
    TCGGTTTCTC CTTCACGCGA CGAGATCTTT TAACTTTGGG TGATATCAAA 
    ACTTACCATG CACGATCTCA CAAAACATTA ATCATTTGAA GTTAAAGAAA 
    AACGCAAAGT GTGCAAGAAA AAGAAGCTTT TCAAGACATT TCAAAGTCTC 
    ACGATGTGTT AACTTTATTG ATTATTTGGT GTTTTCCTTA ACTAATCAAG 
    CATGTATAAT AATATAAGTA ACTAAAACGT TCACGCAAAT ATATACATAA 
    AGCAAAAGAA CGACCGCAAG AAAACAGAAG TCCATTTATC ACTAATCCAA 
    CGGCCAATAT TTTCACACCT TCACCAAGTA ACAAACTAAG TCAAAAAAGC 
    ATTACTAAAG ACACAAAGAT AATTGCCGCT TAAGTGCTTA TAGCTTTCTT 
    CTTCCACTCT TTATTAACCC TTCACCTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21809435 [Map]; Strand: w
      • AT5G53730.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: -625; Region: promoter
    Flanking Genome Sequence: GT14621 - 5-prime edge 
    GAGCTATGTG TGTATATTTG ATGTTTCAAG TGCTTGAAAT TTTTAGTTTA 
    TTTCAAGTAC TTTAAAGTAG GATTGGTTTT GAATGCCAGC AATTTTTTCC 
    ATCTGATGTC CATTGTCTTT TATTTAGATT CCTCCATCTA TAATATTTAA 
    TATATAAGTA AATTGGTCTT CTTCTTTTTT TCCAAAGAAA TTAAACTGGT 
    CTCTTAAAAT ATACTATGAT AATTAAATAA ATGGTTTTAG GTCGTCAACC 
    GGTAAAAGCA CTTTTAATTT CTTTAAGAAA ATTAATGTCT TGTATTAAGC 
    AATAAAAGAT TACTATATAA GAACTTTGTT ATCAAATATT CTTATGC

AT5G53730.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G44220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR