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GT14625

CSHL Arabidopsis genetrap mutant lines

Original: GT14625

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14625

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18762998 [Map]; Strand: w
      • AT3G50560.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14625 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACCTCC 
    ATGTATATGA AATAGTTACT AAGTCACGCC CATCAGCTAA TATTAATCAC 
    AAAACGGTGC ACTTATTGCC GATCCACTAC AAAAAATATA TATAACACTT 
    TTTTTTAGTA ACACTTAAGG ATATACTCAG GTTGGTCACT CTCTTAATAT 
    AGTCGGGTAA ATTGTGCAGG TAGGTTATCT AGAGTAGCAG AAGAGATAGC 
    AAGAGAAGAG AAAGCACAAG TGTTTGCTAT AAGAATTGAT TGTGCAGATC 
    CAAGAAGTGT AAGAGAAGCC TTCGAAGGAG TATTGTCGTT AGGGTTCGTG 
    GAGGTTTTAG TGACAATGCT TATC

AT3G50560.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10050.1); Has 28315 Blast hits to 28305 proteins in 2489 species: Archae - 298; Bacteria - 21162; Metazoa - 1441; Fungi - 797; Plants - 407; Viruses - 0; Other Eukaryotes - 4210 (source: NCBI BLink).
Link
InterPro Scan - TAIR