1. Home
  2. Mutant Lines
  3. GT14648

GT14648

CSHL Arabidopsis genetrap mutant lines

Original: GT14648

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14648

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5753351 [Map]; Strand: c
      • AT2G13800.1 - [+] show detail - somatic embryogenesis receptor-like kinase 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14648 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATCCAGA GTCACCGGAA 
    ACACACAAGG TTTCTTCCGT CTTCAGTTGA ATTTCTCATT CCGGTTTCAA
    AAGAGAAACT TTTTCTTATT TGCAATTTTG TAAAGGCAAC AACTTTATTC
    CATTGATCCG TTGTTGATGT AAAGGCAACA ACTTTCTGTC TACAGTTGAT
    GCTCTAATTG CTCTAAGAAG CAGTTTAGGT GACCATGCAA ACAATATACT
    CCAAAGCTGG AATGCCACTC ATGTTACTCC ATGTTCATGG TTCTCTTCTA
    CTTCGACAAA CTGAAAACAG TGTTATTCGT CTGTAAGTTT CTCTCTGTCT
    CCCTCTGCTG GTTTTATAAC TGAATGATTC AAGTCTTTTA CTGAGTGCTC
    AGTGACCTGG GGAGTGCTAA TTTATCTGGA GAACTGGTGC CACAGCTTGC
    TCAGCTTCCA AATTTGCAGT ACTTGTATGC TTCATCTTAT TTTCTGATTG
    CTAATTATGT ATCTTGTTTG TTACATATTG CATAATGTTC TCTGTAACAT
    GGATTTTTGC TAGTTTAAGA TATTTCCTAT TGACGAATTC TCTCTAATCA
    GAAATATAAT TAAGCAAATC TTAATGACAG GGAACTTATT AACAATAATA
    TTACTGGGGA GATACCTGAG GAGCTTGGCG ACTTGATGGA ACTAGTAAGC
    TTGGACCTTT TTGCAAACAA CATAAGCGGT CCCATCCCTT CCTCTCTTG
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23292335 [Map]; Strand: w
      • AT1G62880.1 - [+] show detail - Cornichon family protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G62880.2 - [+] show detail - Cornichon family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14648 - 5-prime edge
    CTTCTTGCTT TTTGTATTTG AATAAACTCT GCTTAGGCTT ATTCGATCAC 
    TGTATTGAAC TAAATTTAGT GTTTTGTGTT CTTTCAATCA TAAATCGTTT
    ATAAGAAATG TTTCTAAGTT TTGGGAATGT GATAAAGTTA GTAACTTTAG
    GGTTTCTTTA TATAATAACT AGTTAATCTG TCAACTAGAA ACAATTTTGT
    TTCTTAAATT CTTCAATTGC TTCTTGATAT ATGTGTATTG AATCTCTAGA
    TGTTATCTTC TCAGTTTATA TCAATCCAGC AAGTATCTGT GAGTGTGTAC
    AAGTGTGTGT GCTCACGGGT ATTAGAGTTT ACTTCTTAAT GTTTCTGGAT
    TAGTAAGCTC TGATTTGGTA TCTGTAGAGT TGATCTATAA TGTTTTGAGT
    AATGAGATTC ATAATAACCA GATATTTTAT TAGGAGAGTC TTGATCATAT
    GTCTCTGCTA TTTTGCTTTG CTTGTGTCCT TGTACCGAAA CTGACGGTGC
    TTATTGAAAT GATATTTTGT TGCAGCTTAT T

AT1G62880.1

Model type
Protein coding
Short Description
Cornichon family protein
Computational Description
Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12390.1); Has 615 Blast hits to 615 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 159; Plants - 94; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62880.2

Model type
Protein coding
Short Description
Cornichon family protein
Computational Description
Cornichon family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G13800.1

Model type
Protein coding
Short Description
somatic embryogenesis receptor-like kinase 5
Computational Description
somatic embryogenesis receptor-like kinase 5 (SERK5); FUNCTIONS IN: protein kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR