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Mutant Lines
GT14648

GT14648

CSHL Arabidopsis genetrap mutant lines

Original: GT14648

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14648

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 5753351 [Map]; Strand: c
- AT2G13800.1 - [+] show detail - somatic embryogenesis receptor-like kinase 5
  Distance: 0; Region: exon1 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATCCAGA GTCACCGGAA 
ACACACAAGG TTTCTTCCGT CTTCAGTTGA ATTTCTCATT CCGGTTTCAA 
AAGAGAAACT TTTTCTTATT TGCAATTTTG TAAAGGCAAC AACTTTATTC 
CATTGATCCG TTGTTGATGT AAAGGCAACA ACTTTCTGTC TACAGTTGAT 
GCTCTAATTG CTCTAAGAAG CAGTTTAGGT GACCATGCAA ACAATATACT 
CCAAAGCTGG AATGCCACTC ATGTTACTCC ATGTTCATGG TTCTCTTCTA 
CTTCGACAAA CTGAAAACAG TGTTATTCGT CTGTAAGTTT CTCTCTGTCT 
CCCTCTGCTG GTTTTATAAC TGAATGATTC AAGTCTTTTA CTGAGTGCTC 
AGTGACCTGG GGAGTGCTAA TTTATCTGGA GAACTGGTGC CACAGCTTGC 
TCAGCTTCCA AATTTGCAGT ACTTGTATGC TTCATCTTAT TTTCTGATTG 
CTAATTATGT ATCTTGTTTG TTACATATTG CATAATGTTC TCTGTAACAT 
GGATTTTTGC TAGTTTAAGA TATTTCCTAT TGACGAATTC TCTCTAATCA 
GAAATATAAT TAAGCAAATC TTAATGACAG GGAACTTATT AACAATAATA 
TTACTGGGGA GATACCTGAG GAGCTTGGCG ACTTGATGGA ACTAGTAAGC 
TTGGACCTTT TTGCAAACAA CATAAGCGGT CCCATCCCTT CCTCTCTTG

5 prime edge [+] show sequence

Chromosome: 1; Position: 23292335 [Map]; Strand: w
- AT1G62880.1 - [+] show detail - Cornichon family protein
  Distance: 0; Region: intron1 (CDS)
- AT1G62880.2 - [+] show detail - Cornichon family protein
  Distance: 0; Region: intron1 (CDS)

CTTCTTGCTT TTTGTATTTG AATAAACTCT GCTTAGGCTT ATTCGATCAC 
TGTATTGAAC TAAATTTAGT GTTTTGTGTT CTTTCAATCA TAAATCGTTT 
ATAAGAAATG TTTCTAAGTT TTGGGAATGT GATAAAGTTA GTAACTTTAG 
GGTTTCTTTA TATAATAACT AGTTAATCTG TCAACTAGAA ACAATTTTGT 
TTCTTAAATT CTTCAATTGC TTCTTGATAT ATGTGTATTG AATCTCTAGA 
TGTTATCTTC TCAGTTTATA TCAATCCAGC AAGTATCTGT GAGTGTGTAC 
AAGTGTGTGT GCTCACGGGT ATTAGAGTTT ACTTCTTAAT GTTTCTGGAT 
TAGTAAGCTC TGATTTGGTA TCTGTAGAGT TGATCTATAA TGTTTTGAGT 
AATGAGATTC ATAATAACCA GATATTTTAT TAGGAGAGTC TTGATCATAT 
GTCTCTGCTA TTTTGCTTTG CTTGTGTCCT TGTACCGAAA CTGACGGTGC 
TTATTGAAAT GATATTTTGT TGCAGCTTAT T

AT1G62880.1

Model type: Protein coding
Short Description: Cornichon family protein
Computational Description: Cornichon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cornichon (InterPro:IPR003377); BEST Arabidopsis thaliana protein match is: Cornichon family protein (TAIR:AT1G12390.1); Has 615 Blast hits to 615 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 316; Fungi - 159; Plants - 94; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G62880.2

Model type: Protein coding
Short Description: Cornichon family protein
Computational Description: Cornichon family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G13800.1

Model type: Protein coding
Short Description: somatic embryogenesis receptor-like kinase 5
Computational Description: somatic embryogenesis receptor-like kinase 5 (SERK5); FUNCTIONS IN: protein kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 4 (TAIR:AT2G13790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR