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GT14650

CSHL Arabidopsis genetrap mutant lines

Original: GT14650

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14650

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 616580 [Map]; Strand: c
      • AT4G01455.1 - [+] show detail - pre-tRNA
        Distance: -4648; Region: intergenic
      • AT4G01460.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -4179; Region: intergenic
    Flanking Genome Sequence: GT14650 - 5-prime edge 
    TCCATCCTAC TTTCTCCCTG GTTTTGGCTT TACATTTATC CAGTTATTGG 
    TTTTATTTTG TTAAATCATA GTTATTACCT TTCTTTAAAA TATATCTTAT 
    TTTCATCTGT TGTTAAAAAA AAAAAAAATT TTTTTAAAAT AAATTCGGGT 
    GAAATTTTTT TAAAAGGGCC CTCCTTCCCC CGGCAATTTT TTGGAAAATT 
    CCCCCGGGCC CAGAGGAAAA ATTGGAAACC CAACACTTTC TTAAAAAAAA 
    AAATACCCTT TTTCTCCCCG ACCCCTTTGA AGGGAGGGAT TGGAATTTCT 
    TAGGGAACCT CCAAATCCTG AAACCTTTTT TCCGCCCCCT TGCTTTTCAC 
    CGAAAACGGG GAATTTTTTT ATTGCCAAAA AAATGTCCCA TTTTTTTTCC 
    CCAAGCAAAA AAGGGATTAA ATTTTTTTTA ATTTTTAAAA AAATTTTTTC 
    TTTTCCACCC CCAATTCCAG GGAAAACCCG GCTTGAAAAA ATTGAAATTT 
    AAAAATTTTT TTTTTTTTTT TTAAAAAAAA AACT

AT4G01455.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Glu (anticodon: TTC)
Link
InterPro Scan - TAIR

AT4G01460.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G61950.1); Has 1536 Blast hits to 1519 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 44; Plants - 1468; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR