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Mutant Lines
GT14654

GT14654

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT14654

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 25854385 [Map]; Strand: c
  - AT5G64670.1 - [+] show detail - Ribosomal protein L18e/L15 superfamily protein
    Distance: -396; Region: promoter
  - AT5G64680.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: intron1 (5UTR)
  - AT5G64680.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: intron1 (5UTR)
  - AT5G64680.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: GT14654 - 3-prime edge
```
TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATCTTG AACACTTGTT 
TTCTCGATTT TGCAGGTTTT GTGAAATCGC GAGAGCTGAT TTGAGCAGAG 
ATGGATTTCG ATTTCAAAGT TTCCGGAGAT TTCATAGTCA GTGGCGCAGA 
GCAGCTAGAT GACACTGATT TGACGCGTTC TGATGAGTTT TGGCTTATCC 
AAGCTCCTTT AGGCCAAGTA TGTTTAGAGA ATGATTCTTT ATTGCAAATT 
TGATCCTCAT GTAATGTTCT ACAGCTAAAT GACTTTTCTT ATCGCAGTTT 
CCAGAAATCG AAGAGAACAC TCTTAAGATT GAGCCAGACA AAGATGGGTT 
ATTTGGAGAA TTCAAGGATT CAAATGGTAT GGTTATGTTT TGTGTTCTTT 
CATAGAAATA TTTTAGTTTT GATCTCCAAA AGCTGGCTCA TTACACCTTT 
GTTTAGGTGC AAAGTATGAT CTTGCTAGCT TTCATTCTCA AGATGCTGGT 
GCAGAGTTGA TTATACCTTC TGAAGAATCA ATGATTGGGA TATTCCCATT 
ACTTTA
```
5 prime edge [+] show sequence
1. Chromosome: 5; Position: 25854313 [Map]; Strand: c
  - AT5G64670.1 - [+] show detail - Ribosomal protein L18e/L15 superfamily protein
    Distance: -324; Region: promoter
  - AT5G64680.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: intron1 (5UTR)
  - AT5G64680.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: intron1 (5UTR)
  - AT5G64680.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: GT14654 - 5-prime edge
```
CTTTCTCCCT GTTCAGATAG CGAGAGCTTT AACATATATA ATAAACAAAG 
CTTTTGAACA AACTCAAACT CTGTCAAAAT CGCAATTATA AATCTCTTCA 
AAAGACATAA GTTAGTAAGA AAAAACAAGA AACTGGATGC AAATCGGAAC 
GAGAAAGAAA GATGGCTTCG TCGGCGGCGG AAAAGAGAGA GAATCGTTAC 
CGGAGAAATA GCAATTCGGC GATGACCTAA AACCCTTCCC AATTTATTTC 
TCTGTTTTAT TTTATTTTGA AGTTCACTCA AAACGACATA GTTTAGTGAA 
TTGGCGGGTG GATGAGACAT CTGGGCTGAG AATATTGGGC CATAATGGGC 
CTTTAAGTGA CAGTACTGAA GAAATAAACA ACAGAAAAGG AAAACAACTT 
CTATAATCAG AGGAAAAGGG GGAAAAAGGA GTCTTAGTG
```

AT5G64670.1

Model type: Protein coding
Short Description: Ribosomal protein L18e/L15 superfamily protein
Computational Description: Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749); BEST Arabidopsis thaliana protein match is: ribosomal protein L15 (TAIR:AT3G25920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G64680.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G64680.2

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G64680.3

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR