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GT14666

CSHL Arabidopsis genetrap mutant lines

Original: GT14666

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14666

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 351402 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 1223; Region: intergenic
      • AT2G01818.1 - [+] show detail - PLATZ transcription factor family protein
        Distance: 2055; Region: intergenic
    Flanking Genome Sequence: GT14666 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTTTAA 
    AGATGATTAT GGTATTGTTT TGGTTTTCGT GTAATTTCAT TTCCCTCAAC 
    AACAAAGATA CGCGACAAAG GTCTCTGGCC CCAATAAACG CTCCATGTTG 
    ACTAGTGAGC CCCAGGTGGT CAATATTTAT TTATCTTGTT TTGTAAAATA 
    TTTTATTCTT TCTAACTAAC ACAATTAAGA AATTTTCTCA TCAAAATATC 
    TTTAAATAAA AATTTATGTA TTACATAATA TTAAAAGCAA GTATATGTTC 
    ATCTTTTTAT TAGAGTTTTC AGCTAGGGGC GGGCATTCGG GTAAGCGGGT 
    TGGATTCGGG TAAAACCCGA TCGGGTACGA GTATTTTGGG TAGAAAAGTT 
    TAGAATCTAA TAAGATAAAT CTAAAATATC GGTTTGGTTT CGATTCGGAT 
    CTAATCGGAT TCGAGTCGGT TCGGATATAG ATTTTTGGGC CTAAATTGGA 
    ACCAATACCC GAATTTTTGG ATAAATACCC AGATTTTTCA GGTAAATACC 
    CGGATTTTCG GGTAAAATTT CGGGTTTCGG GTAAAATTTA GATTTTCGGG 
    TATTTTTGGA TTCGGGTCGG GTTTGGATTC GGTTTTTTGG GTAGAGGA

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01818.1

Model type
Protein coding
Short Description
PLATZ transcription factor family protein
Computational Description
PLATZ transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 397 Blast hits to 397 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR