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Mutant Lines
GT14675

GT14675

CSHL Arabidopsis genetrap mutant lines

Original: GT14675

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14675

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 20901465 [Map]; Strand: c
- AT1G55880.1 - [+] show detail - Pyridoxal-5'-phosphate-dependent enzyme family protein
  Distance: -282; Region: promoter
- AT1G55880.2 - [+] show detail - Pyridoxal-5'-phosphate-dependent enzyme family protein
  Distance: -300; Region: promoter
- AT1G55890.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTC 
ACTGCCGCAA TCTCGCCTCC TCAAAAGTCA CTAACCAGTC TCGTGAATGG 
CGAACGAAAC CCCAAACGGA TCGTGGAGAA ATTCAAGAAG GCATGTGAGT 
CGGAGCGGTT CCGGACCAAC ATAGCCGTGT ACGATAGAAC CGTGCGCCGT 
CTCGTAGCCG CAAAGAGATT ACACTATGTC GAAGAGATTT TGGAGGAGCA 
GAAGAAGTAC CGCGACATGT CAAAAGAGGG ATTCGCGGCG AGGATCATTT 
CTCTGTATGG AAAAGCCGGC ATGTTTGAAA ATGCACAGAA GGTGTTCGAC 
GAAATGCCAA ACAGAGACTG CAAGAGGTCA GTGTTGTCCT TCAATGCCTT 
GCTTAGTGCA TATGGACTTT CCAAGAAATT CGATGTGGTT GAAGAACTTT 
TCAATGAGTT ACCTGGAAAG TTATCAATCA AACCAGATAT TGTATCTTAC 
AATACTTTGA TTAAGGCATT GTGTGAGAAG GATTCTTTAC CTGAAGCTGT 
TGCATTGCTT GATGAGATTG AGAACAAGGG ACTAAAACCT GATATAGTTA 
CATTCAACAC ACTTTTACTG TCTTCGTATC TAAAGGGACA GTTTGAGCTA 
GGGGAAGAGA TATGGGCTAA AATGGTGG

AT1G55880.1

Model type: Protein coding
Short Description: Pyridoxal-5'-phosphate-dependent enzyme family protein
Computational Description: Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: lyase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: cysteine biosynthetic process from serine, metabolic process, cellular amino acid metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: L-cysteine desulfhydrase 1 (TAIR:AT5G28030.1); Has 17388 Blast hits to 17372 proteins in 2648 species: Archae - 443; Bacteria - 11523; Metazoa - 365; Fungi - 537; Plants - 503; Viruses - 2; Other Eukaryotes - 4015 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G55880.2

Model type: Protein coding
Short Description: Pyridoxal-5'-phosphate-dependent enzyme family protein
Computational Description: Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: lyase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: cysteine biosynthetic process from serine, metabolic process, cellular amino acid metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: L-cysteine desulfhydrase 1 (TAIR:AT5G28030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G55890.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G13160.1); Has 41765 Blast hits to 13385 proteins in 277 species: Archae - 5; Bacteria - 48; Metazoa - 331; Fungi - 377; Plants - 39933; Viruses - 0; Other Eukaryotes - 1071 (source: NCBI BLink).
Link: InterPro Scan - TAIR