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GT14678

CSHL Arabidopsis genetrap mutant lines

Original: GT14678

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14678

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 402324 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 1590; Region: intergenic
      • AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: 996; Region: intergenic
    Flanking Genome Sequence: GT14678 - 5-prime edge 
    ACTTTCTCCC TGCAAAGAGA CCCATGTCTC TTTGCATTTT TTACCAAATA 
    GACACACGCA TGGATATATT CATATATTTA TTAAAAAGTA ACTGTTATTA 
    GCTGGTGCAA TAATTTTTAC AAAACTTTGT TCCGATCCAT GTAAAAAAAA 
    GAAGAGTGAA AATATATCAA ACCCCGCTTA TTTTTAAAAA ATTTGCTTAG 
    TAACAGATGA CGACCGGACG TGAAAGCTTA AGGCATATTG AGACAGCCTA 
    GTTCGGATAA GACCGGAGGA GCAAGTTGAC CAAGCGATGC AATACAAAAT 
    CAACTCTCAT ACAGAGTACA AAATTAACTC TCAAGGGGTT AATTTCAAAC 
    CTCAAATTCT TGTTGTAAGT TATCTTTGAA ATACTTCTCT TTC

AT4G00930.1

Model type
Protein coding
Short Description
COP1-interacting protein 4.1
Curator Summary
Encodes COP1-interacting protein CIP4.1.
Computational Description
COP1-interacting protein 4.1 (CIP4.1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 4 (TAIR:AT5G37190.1); Has 16041 Blast hits to 11566 proteins in 1061 species: Archae - 57; Bacteria - 4473; Metazoa - 4631; Fungi - 1351; Plants - 620; Viruses - 68; Other Eukaryotes - 4841 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00940.1

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Computational Description
Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR