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GT14679

CSHL Arabidopsis genetrap mutant lines

Original: GT14679

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14679

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 402395 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 1661; Region: intergenic
      • AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: 925; Region: intergenic
    Flanking Genome Sequence: GT14679 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACATCTT TGGTCTTCTC 
    ATGCGAATAA AAACAAACTA AATCAAATAG AAATAGAATC TCAGTGGGAA
    TTTGAGAAAA CGATTTGTGA TTAATTTGGA ATAGTCTTTA CTTAGTTGGA
    GCAGGTATAT TGTCGTGTCT TTTTATTACG CCAAAATAAT AACAATATAT
    AATAAGAATA CTATGTTACT TTTTAATGAT GATTTTATAT TACAGGTCGT
    GTTGTATTCA ATACGCAATT GTTCATGACT TCATGGACAG TTGGTCTCCT
    TAATTAGTTT CCTAATTAGA CTTTGCTTTC GAGATAAGTC TCACACAAAA
    TTGAATTGAT TCAAACATTT ACATAACAAC TAATTGGAGC CATGCATGAT
    CTAGAAACTA CTCATCCGTC CTATATCCTA GATCATTAAG TCACGATCCA
    CGGATATTAG TTTACGAAAC TTTAAATTTC CTATACGTAT ATAACATTAT
    GTTATTATCG TTTGCATCTT GCCAAATTTG TTTCGGACTA TATGCAATTT
    ACGAAAAGAA GAAGAAAATC ATTAACATAT GTCTCACGTA CACTCATTAA
    ATTTAGATGC CTATACTTAT TAACGTGAAA CACCGCAAAA GTACTTTATT
    TGGAAACCTA

AT4G00930.1

Model type
Protein coding
Short Description
COP1-interacting protein 4.1
Curator Summary
Encodes COP1-interacting protein CIP4.1.
Computational Description
COP1-interacting protein 4.1 (CIP4.1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 4 (TAIR:AT5G37190.1); Has 16041 Blast hits to 11566 proteins in 1061 species: Archae - 57; Bacteria - 4473; Metazoa - 4631; Fungi - 1351; Plants - 620; Viruses - 68; Other Eukaryotes - 4841 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00940.1

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Computational Description
Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR