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GT14693

CSHL Arabidopsis genetrap mutant lines

Original: GT14693

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14693

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 45057 [Map]; Strand: w
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -1860; Region: intergenic
      • AT4G00124.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 218; Region: intergenic
    Flanking Genome Sequence: GT14693 - 5-prime edge 
    TCCTACTTTC TCCCTGCTCA ACACATGTCT CCATTTTTAG TGCTCATTAT 
    TTTGACCTAA TTTTCTTCTC TCTCTCCTCT TTTGACAACT CCTATACACC 
    AAAATAGGCA ATTTAACATC ATTGTTCTTC TATTTCTTGT CTTTCTTCTA 
    AACCCCACGG TTTCTTCGAC ATTTTCTTAC AAGCCCTTTC AACGGCCTTG 
    ATTTGATCTT AGCTAGGAAA TATGAGCTGG ATACGATAAA TGACTTCTTC 
    AACGTTCTCT TTATGATTTT TGGTGTCAAT TTCTAGTTCT TAAGTTGTTT 
    TATTTGACGA TTTAACAGGA TCTCTCCCCC ATAACTCATT ACACGAAGTG 
    GGGACGGCTT CTTTCGACAT TAAGGTATTG CCCATTGTTT AAATTCTCAA 
    GTGGATAAGT AAACTTATAA TCACCACTAA TTATATATAT AAGTATATTA 
    CTAATTAATC GGTCTAATTA AGATACCGTC TAAATGTCGT TGTCCACATG 
    AAATTTCTAT ATGTTG

AT4G00120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00124.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR