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GT14694

CSHL Arabidopsis genetrap mutant lines

Original: GT14694

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14694

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 45051 [Map]; Strand: w
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -1854; Region: intergenic
      • AT4G00124.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 224; Region: intergenic
    Flanking Genome Sequence: GT14694 - 5-prime edge 
    ATTTCCATCC TACTTTATCC CTGCTCACAC ATGTCTCCAT TTTTAGTGCT 
    CATTATTTTG ACCTAATTTT CATCTCTCTC GACCAATTTG ACAACTCCTA 
    TACACCAAAA GAGGCAATTT AACATCATTG CTCTTCTATT TCTTGGCTTT 
    CTTCTAAACC CCACGGTTTC TTCCACATTT TCTTACAAGC CCTTTCAACG 
    GCCTTGATTT GATCTTAGCT AGGAAATATG AGCTGGATAC GATAAATGAC 
    TTCTTCAACG TTCTCTTTAT GATTTTTGGT GTCAATTACT AGTTCTTAAG 
    CTGTTTTATT TGACGATTTA ACAGGATCTC TCCCCCATAA CTCATTACAC 
    GAAGTGGGGA CGGCTTCTTT CGACATTAAG GTATTGCCCA TTGTTTAAAT 
    TCTCAAGTGG ATAAGTAAAT TTATAATCAC CACTAATTAT ATATATAAGG 
    ATATTACTAA TTAATCGGGC TGATTAAGAT ACCGTCTAAA TGTTGTTGTC 
    CACATGAAAT TTCTATATGT TGCGTTCATC T

AT4G00120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00124.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR