1. Home
  2. Mutant Lines
  3. GT14695

GT14695

CSHL Arabidopsis genetrap mutant lines

Original: GT14695

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14695

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27199706 [Map]; Strand: w
      • AT1G72260.1 - [+] show detail - thionin 2.1
        Distance: -262; Region: promoter
    Flanking Genome Sequence: GT14695 - 3-prime edge 
    AAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAC 
    TACGGCACTT GATTTTTTAT GTAATATCAA GGGGCATATT TACAGTTTAT 
    AATAATTCTT ACATAGTATA GTAATAAACG TAATTTATAA TATTCAAAGT 
    GAAAATGAAA ACTCCCATGA CCACTTAGAT AAGTTGGTTA GCCGTTAAAA 
    CGAAGAAACA CAAAAATCAC GTTTGTAACT ACTTGGAATT TTTTTTTGCC 
    ATGAGTAACT AACTAAAATC TAGTCCGAAT GTTTCCTAGT ATTTAAAGCA 
    AGTCTGGTTT CAAGACAACT TCATCAATAC AAACTTAGTA GGGTATTCTT 
    TATACGTATA ATAACATCCC TTGTGATCAA ACAAGTAAAC CATTCAAAAG 
    ATGAAAGGAA GAATTTTGAG TTTGAGTTTG CTCATAATGA GTCTGGTCAT 
    GGCACAAGTT CAAGTAGAAG CAAAGATCTG CTGCCCTTCC AACCAAGCTA 
    GAAATGGCTA TAGTGTATGC CGTATAAGGT TTTCCAAGGG AAGGTGTATG 
    CAAGTGAGTG GATGCCAAAA CTCTGATACA TGCCCTCGAG GTTGGGAAAA 
    CGCCATTCTC GAAAACTCAG GTAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27199757 [Map]; Strand: w
      • AT1G72260.1 - [+] show detail - thionin 2.1
        Distance: -313; Region: promoter
      • AT1G72270.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR0...
        Distance: 0; Region: exon18 (CDS)
    Flanking Genome Sequence: GT14695 - 5-prime edge 
    TCCTACTTTC TCCCTGTGCC GTAGGCCAAC GTTTAAAGTT TTCTTTACTA 
    GGCACGGGCC TGCTCACCAT TATCATCAGC TTCACAACCA TTCACACATT 
    CCTCCAGTGA ATCATCACCC GAATCGGTGA ACGAGAGTAT CGTAGGAAGC 
    ACCGTGAGCG AGATGGAAGA TTGTGGCAGC AAAGGAAGGA GGCGAAGAAG 
    AGGAAATGAT AGAGAAGAGA CTGAAGAAGG TGGATTTTGA CATTCGGAAA 
    CAAAGACACC AGCGAGGACC TTTGTCGTCT TCTCAAATAA ACAAACCTCT 
    TTCCCATTCA TCTCACTCGA

AT1G72260.1

Model type
Protein coding
Short Description
thionin 2.1
Curator Summary
Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.
Computational Description
thionin 2.1 (THI2.1); FUNCTIONS IN: toxin receptor binding; INVOLVED IN: response to jasmonic acid stimulus, defense response, jasmonic acid mediated signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Thionin (InterPro:IPR001010); BEST Arabidopsis thaliana protein match is: Plant thionin (TAIR:AT1G66100.1); Has 198 Blast hits to 198 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 198; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G72270.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR