1. Home
  2. Mutant Lines
  3. GT14710

GT14710

CSHL Arabidopsis genetrap mutant lines

Original: GT14710

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14710

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16121918 [Map]; Strand: c
      • AT2G38500.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -2810; Region: intergenic
      • AT2G38510.1 - [+] show detail - MATE efflux family protein
        Distance: -2067; Region: intergenic
    Flanking Genome Sequence: GT14710 - 3-prime edge 
    CTGACTATGT GGAATTTTTT ATTAATACCA AAACTCAACT GGCTACATAT 
    ATAAACGAAG AACCAGATGT TCCCAATAAA AAGAACTTAA AAAAAAAAAA 
    CC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16121815 [Map]; Strand: c
      • AT2G38500.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -2707; Region: intergenic
      • AT2G38510.1 - [+] show detail - MATE efflux family protein
        Distance: -2170; Region: intergenic
    Flanking Genome Sequence: GT14710 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATCT 
    AAAAGTGGAA TGTATAAAGG CAACACTTTA GTAAATTGGT TCAGTCTAAG 
    AGACTGACTA TGTGGAATTT TTTATTAATA CAAAAACTCA ACTGGCTACA 
    TATATAAACG AAGAAACAGA TGTTCCCAAT AAAAAAAACT TAAAAAAAAA 
    AAAAAAAAAA TTTTTCAAAA AAATAGGGAA AAGCCGGGAA ATTTGAAATT 
    TATTTGGGGG GGCCAATTAG GGAGGCTTCC AAAAATCCGG GGGGAATTAA 
    AAAATTT

AT2G38500.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G38510.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G58340.1); Has 11945 Blast hits to 11897 proteins in 2040 species: Archae - 292; Bacteria - 8615; Metazoa - 143; Fungi - 328; Plants - 1321; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink).
Link
InterPro Scan - TAIR