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GT14713

CSHL Arabidopsis genetrap mutant lines

Original: GT14713

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14713

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10489894 [Map]; Strand: c
      • AT2G24660.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT14713 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAA 
    TCCGAACAGC CTCTTTGAAG TGTTTAGGTT CGTCATTAGC AGTGATCGCA 
    GCAAGAAAAG CTTTGTGTCC TGCTGAAAAA CAGTCATCCG AAACATAATC 
    GGACAAAGGA TAGAGAGAAG ATGTACCTTG GACCATTGAC GAGGACTGAG 
    AAGAAGAATC GGGAAGAGCG TGGGGGTTTA TTGGAGAGAC TGTTGCATTG 
    TAAAGAACGT AATCCTGCAG ACGAACCGGC TGTCTAATCT GACGCTTTCT 
    TTGACGAGGA GGCGTAGCTT CAACAAACGG ACTGTCAACA ACGAACAATG 
    GCTGATTATT ACGATTAGGA GTTGAGACAA TATCAGGAGA ATCATCAATT 
    TGAGCCAAAG TATCACCAGA AGCAAGATTT TTATCCGGCG TTGATGAATC 
    AGATGAATCA GCTCGTGAAT TTTGTAAATC GGAAGCAATA GAAGCAGGTG 
    CCACGTCGGA ATCAGAGTCT GGTTCGAAAA CAAAGTCGGT TTGAAGAGCA 
    GAATTTGATT CAGTAACAAC GACCGGTTTA ATAACAGAAT CTGGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10489807 [Map]; Strand: c
      • AT2G24660.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT14713 - 5-prime edge 
    TGATGCAATG TTTAAAGAGG TCGATGCTCT CGAGATTAAT AAGACATGGG 
    ATATCGTTGA TTTGCCACCG GGAAAGGTAG CTATTGGCAG TCAATGGGTG 
    TATAAGACTA AGTATAATGC TGACGGCTCC ATTGAACGAT ACAAAGCTCG 
    TCTTGTTGTT CAAGGGAACA AACAAGTTGA AGGGGAAGAC TACAATGAAA 
    CTTTTGCGCC AGTAGTGAAA ATGACTACGG TTCGTACTCT TCTTCGCCTT 
    GTTGCTGCTA ACCAATGGGA GGTTTATCAA ATGGATGTTA ATAATGCCTT 
    TCTTCATGGT GATCTTGATG AAGAGGTCTA CATGAAGCTA CCTCCTGGTT 
    TTCGTCATTC TCATCCCGAC AAAGTTTGTC GTCTTCGCAA GTCATTGTAT 
    GGTTTGAAAC AAGCCCCTCG GTGCTGGTTT AAGAAGTTGT CTGATGCCCT 
    CTTACGTTTT GGTTTTGTGC AAGGTCATGA AGACTACTCT TTCTTTTCTT 
    ATACACGTAA TGGTATAGAA CTCC

AT2G24660.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.7e-166 P-value blast match to GB:BAA78424 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996363|dbj|BAA78424.1| polyprotein (AtRE2) (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR