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GT14718

CSHL Arabidopsis genetrap mutant lines

Original: GT14718

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14718

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 476873 [Map]; Strand: c
      • AT2G02010.1 - [+] show detail - glutamate decarboxylase 4
        Distance: -279; Region: promoter
    Flanking Genome Sequence: GT14718 - 5-prime edge 
    TCCTACTTTC TCCCTGATTA TGTAAGTGTG AAATTGATCA AATCGCGGGA 
    GATGCTAAAT AAACAAAATC AAAATCACTA ATAAAATGTT CACGATAACT 
    TAGAAAGATC CAATAAAAAG ATGACGGTCG GAATTTGTAT ACGATAGTAA 
    TAAAAGTATT CGTGTTTCTA AAAGTTAGTA ATTCATTGGT CTAAATATTA 
    TAATGAGGAA AAGTCATTGG TAAGGAAAAG GTTTGAAAAA GGAGCACATA 
    AATAAGGACC AGCGATGCTT CCTTTCACGA TGCAAAACAC GAAATGAAGA 
    GACACATTCT CTCTACTATA TATACCATTT GCTCCTCTTC CTCTAATTCC 
    ACTCATTCTT CTTCAACTAC AAAACAAAAA CACTACTACA CATTCTTTCC 
    TCT

AT2G02010.1

Model type
Protein coding
Short Description
glutamate decarboxylase 4
Computational Description
glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink).
Link
InterPro Scan - TAIR