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GT14736

CSHL Arabidopsis genetrap mutant lines

Original: GT14736

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14736

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3565015 [Map]; Strand: c
      • AT3G11380.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14736 - 5-prime edge 
    CTTCTCTGCT CCTTTGGTAT CACCAAGCTT CAAGAGAGAA CCAATCAAAG 
    TTCGAAATTC TTCATTATCC TTCTGTCTTG TCGCCTTGTA CTTGTCCTAT 
    ACACGGTGAA CATCTTCTAT CTCTCCTGCT TCACCATATA GGCTCATGAG 
    TTCCTTATAG TCATGACCCA ACCATTCCTC TGTTTCTTGA AGCATCCTCC 
    TAGCCTTTTG TTTAGAACCG TCTCTCACAT AAGCCTTTGC CATCGCAAGC 
    ATTGTGAGCC CATCAAGCCT TGTAATCTCT TTCCTATCAG CTAGAAACTT 
    GTCCATTGTC GCTACATCAG ATACAGCAGC GTATACTCGC AAAGCGTTGT 
    TCACGGTGAC ATTATCGAGC TCAACGTTGT TCTCCTTCAT CTCACTCGA

AT3G11380.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 4044 Blast hits to 2539 proteins in 107 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 3964; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR