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GT14738

CSHL Arabidopsis genetrap mutant lines

Original: GT14738

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14738

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3565044 [Map]; Strand: c
      • AT3G11380.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14738 - 5-prime edge 
    CTTTCTCCCT GCACCTCATT GTATTATATC TTCTCTGCTC CTTTGGTATC 
    TCAAGCTTCA AGAGAGAACC AATCAAAGTT CGAAATTCTT CATTATCCTT 
    CTGTCTTGTC GCCTTGTACT TGTCCTATAC ACGGTGAACA TCTTCTATCT 
    CTCCTGCTTC ACCATATAGG CTCATGAGTT CCTTATAGTC ATGACCCAAC 
    CATTCCTCTG TTTCTTGAAG CATCCTCCTA GCCTTTTGTT TAGAACCGTC 
    TCTCACATAA GCCTTTGCCA TCGCAAGCAT TGTGAGCCCA TCAAGCCTTG 
    TAATCTCTTT CCTATCAGCT AGAAACTTGT CCATTGTCGC TACATCAGAT 
    ACAGCAGCGT ATACTCGCAA AGCGTTGTTC ACGGTGACAT TATCGAGCTC 
    AAC

AT3G11380.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 4044 Blast hits to 2539 proteins in 107 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 3964; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR