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GT14769

CSHL Arabidopsis genetrap mutant lines

Original: GT14769

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14769

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10316845 [Map]; Strand: w
      • AT5G28340.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT14769 - 5-prime edge 
    CTGGACTACT TCTTCAAAAC ACACGACTAG GAATTGTTCT TAGATATGAT 
    AGAAATCTGT GATTCCGAGA CGGTTGGCAT AATAATGTCC AAGGAGGGTT 
    TTTTCGGCGA AAAGACTATC CCGTTTGAGC GAGTGAAAAG AACGTGTTAT 
    ACCAGGATGA TCGCGAGTCT CTGCCAACAA GGAAACATGT TGGAGGCAGA 
    GAAACTCTTT GCCGACATGT TTGCCGACGT TGACGGTGAT GACTTGTTGG 
    CAGGACCTGA TGTTTCAACA TTCAGAGCAA TGATCAATGG TTATGTTAAG 
    GTAGGGAGAG TCGATGATGC TATCAAGACC TTGAACAAGA TGAAGATTTC 
    TAATCTCAGA AAGCTTTCTA TTCATCAAGC CACATAACTA GACTCTTTAT 
    TTTATTTTTA TCCATGTTGA TTCTGAAAAT CACACAATAA AATTTTTTAA 
    AA

AT5G28340.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G28380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR