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GT14794

CSHL Arabidopsis genetrap mutant lines

Original: GT14794

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14794

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2943947 [Map]; Strand: w
      • AT4G05610.1 - [+] show detail - transposable element gene
        Distance: 24751; Region: intergenic
      • AT4G05612.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -15147; Region: intergenic
    2. Chromosome: 4; Position: 2948394 [Map]; Strand: w
      • AT4G05610.1 - [+] show detail - transposable element gene
        Distance: 29198; Region: intergenic
      • AT4G05612.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -10700; Region: intergenic
    Flanking Genome Sequence: GT14794 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTTCTA 
    ACAAGGAAAC ATTAATTTAG CTTTTGGGAA TTAGTTGCGG TTCTAGTTCT 
    TATACTCAAT CATACACATG ACATCTAGCC ATATTTGATT CCGAAAAACT 
    AACCAAGCTT CTTATTACCT CACAAAGCTT TGATGGTGTA GCCGAAGTCG 
    GTATGATTCT TTGGCTTTGT ATCTACAAAC AAGAAACATT ACTTTAGCTT 
    TTGGGAATCG GTTGCGGTTC TAGTTCTTAT ACTCAATGAT ACACATGATA 
    TCCTGTAATA TTTGACTCTA AAATACTAAC CAAGCTTCTT ATTGCTTCTC 
    AAAATTTTGA TGGTGTACAC GAAGTCCGTA TGAGTCTTTG GCTTTGTATC 
    TTCTAACAAG GAAACATAAC TTTAGCTATT GGGAATCGGT TGCCATTCTA 
    GTTCA

AT4G05610.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein, putative retrotransposon-like orf - Arabidopsis thaliana,PID:g4309868
Link
InterPro Scan - TAIR

AT4G05612.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G08986.1); Has 183 Blast hits to 96 proteins in 39 species: Archae - 0; Bacteria - 19; Metazoa - 58; Fungi - 4; Plants - 39; Viruses - 9; Other Eukaryotes - 54 (source: NCBI BLink).
Link
InterPro Scan - TAIR