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GT14798

CSHL Arabidopsis genetrap mutant lines

Original: GT14798

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14798

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3505998 [Map]; Strand: c
      • AT3G11180.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: intron3 (CDS)
      • AT3G11180.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT14798 - 3-prime edge 
    ACGGTAGAGG ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTGGGTAA 
    AACACTAATA ATTGTCATGA TATAGTTGGT ACTGAACTAC TGATAGAGGA 
    TCATATTCCT TAGTTGTAGT TCCACGTTTT AGACATGACT TAGAATAGCA 
    ATAAAAGGTT AACCGTTTCA ACTTCAGGCC AAAATTTTAA ATAATACTAA 
    GTTTTTCCAA AAAGTTGTAA TGACTTATGT CATTTTCGTA TCGTCAAGCC 
    ATCAAAATGA TTTGATTTTA TACAAGACTA AATTAAATAT AAATAAATGC 
    AGAAATATAT TTTGTGGTTT TAACTTTTAG AGTACCATCG TAGACAACAA 
    TCATGTTGCA AAAGACAAAT TGTCCGAAAG TGCATGCACA AATTGAGCAT 
    TATTAACGTT TAATGAAGTG CAATATATGT TAGTCATGCA ATAGATGCAA 
    TTTTCAATAC TAACGTATAT GTTTCTCTTT TGAAAACCGG CAGATACTAA 
    GCAATTCGAA ATACAAGAGC GTGGAACATC GAGTGATAGT GAATTCGGAA 
    AAAGAAAGGG TTTCACTAGC ATTCTTCTAT AACCCTAAGA GTGACATTCC 
    GAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3505996 [Map]; Strand: c
      • AT3G11180.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: intron3 (CDS)
      • AT3G11180.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT14798 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTGGGT 
    AAAACACTAA TAATTGTCAT GATATAGTTG GTACTGAACT ACTGATAGAG 
    GATCATATTC CTTAGTTGTA GTTCCACGTT TTAGACATGA CTTAGAATAG 
    CAATAAAAGG TTAACCGTTT CAACTTCAGG CCAAAATTTT AAATAATACT 
    AAGTTTTTCC AAAAAGTTGT AATGACTTAT GTCATTTTCG TATCGTCAAG 
    CCATCAAAAT GATTTGATTT TATACAAGAC TAAATTAAAT ATAAATAAAT 
    GCAGAAATAT ATTTTGTGGT TTTAACTTTT AGAGTACCAT CGTAGACAAC 
    AATCATGTTG CAAAAGACAA ATTGTCCGAA AGTGCATGCA CAAATTGAGC 
    ATTATTAACG TTTAATGAAG TGCAATATAT GTTAGTCATG CAATAGATGC 
    AATTTTCAAT ACTAACGTAT ATGTTTCTCT TTTGAAAACC GGCAGATACT 
    AAGCAATTCG AAATACAAGA GCGTGGAACA TCGAGTGATA GTGAATTCGG 
    AAAAAGAAAG GGTTTCACTA GCATTCTTCT ATAACCCTAA GAGTGACATT 
    CCGATCCAAC CAATGCAACA ACTTCTCACC T

AT3G11180.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8772 Blast hits to 8716 proteins in 1011 species: Archae - 0; Bacteria - 1149; Metazoa - 114; Fungi - 1021; Plants - 4999; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11180.2

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1).
Link
InterPro Scan - TAIR